Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq11307 172 1e-37 seq14056 170 4e-37 seq11306 163 6e-35 >seq11307 Length=654 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||||||||| || || || || | |||| || || |||||||||||||| || Sbjct 390 ACCGCCACGCAGGCGCAGCACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCTGC 449 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| || ||||| || || || || || ||||||| || || ||||| ||| Sbjct 450 GAGCGTGCGACCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGCGG 509 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| || || ||| | || || ||||| | || || Sbjct 510 AATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCAATGGTGTCGCTGGACTCCAC 569 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| | ||||||||| ||||||| ||||| ||||| |||||||| Sbjct 570 CTCGAGCGCGATCGTCTTGCCCGTCAGTGTCTTCACGAAGATCTGCAT 617 >seq14056 Length=822 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| |||||||| || || || || | |||| || || |||||||||||||| || Sbjct 689 CCACCGCGCAGGCGCAGCACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCTGCG 630 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||||||||| || || || || || ||||||| || || ||||| |||| Sbjct 629 AGCGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGCGGA 570 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| | || || || || | || || Sbjct 569 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCAATGGTATCGCTGGACTCCACC 510 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| | |||||||| ||||||| ||||| ||||| |||||||| Sbjct 509 TCGAGTGCAATCGTCTTGCCCGTCAGTGTCTTCACGAAGATCTGCAT 463 >seq11306 Length=946 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| |||||||| || || || || | |||| || || |||||||||||||| || Sbjct 501 ACCACCGCGCAGGCGCAGCACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCTGC 560 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| || ||||| || || || || || ||||||| || || ||||| ||| Sbjct 561 GAGCGTGCGACCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGCGG 620 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| || || ||| | || || || || || || || Sbjct 621 AATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCAATGGTATCGCTAGACTCCAC 680 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| | ||||||||| ||||||| ||||| || || || ||||| Sbjct 681 CTCGAGCGCGATCGTCTTGCCCGTCAGTGTCTTCACAAAAATTTGCAT 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046428673694716