Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq763 86.0 4e-12 >seq763 Length=1889 Score = 86.0 bits (94), Expect = 4e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 22738 ACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGC 22796 || || ||| | || ||||||||||| |||||| | | || ||||| || || |||| | Sbjct 1054 ACGCGGCTCGTCGCGTTTGCGGCTGTCGAAGGCATATTTTTCTCTGGCTCGTTCTGCG-C 996 Query 22797 CATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGAT 22856 ||| || ||| | ||||| ||| | ||||| ||| | | || ||||||| |||| Sbjct 995 CATTTTTTGGTTAAAGAAGCGTGGCTTGATGCCCGGGCTCACCTTCAGCAACGAGCTGAT 936 Query 22857 TAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 | ||||| || ||||| ||| |||||||||||| Sbjct 935 TTCACGTGATGAGGGTCTGCACACTGACTTTGCTTG 900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356224803924478