Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq763 87.8 3e-12 >seq763 Length=1889 Score = 87.8 bits (96), Expect = 3e-12 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 159920 AGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATG 159979 ||||| |||||||| |||||| ||||| || || || || | ||||||| | | || Sbjct 897 AGGCAAGCAAAGTCAGTGTGCAGACCCTCATCACGTGAAATCAGCTCGTTGCTGAAGGTG 956 Query 159980 AGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCA-AAAGCACCGCTAAA 160038 || || ||||| | |||||| || | ||||||||||| |||| || | || || Sbjct 957 AGCCCGGGCATCAAGCCACGCTTCTTTAACCAAAAAATGG-CGCAGAACGAGCCAGAGAA 1015 Query 160039 AAAGATCCCCTCCACGGCCGCAAACGCCACGAGCC 160073 ||| || || || || ||||||||||| ||||||| Sbjct 1016 AAATATGCCTTCGACAGCCGCAAACGCGACGAGCC 1050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795135062694560