Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1149 102 2e-16 >seq1149 Length=36903 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | || || ||||| || ||||||||||| || | ||||||||| || | || Sbjct 9607 TCGAAGGCGGAGTACCAGGTGCAGTGTCGACTCCTTCTGAATGTTGTAGTCCGCAAGCGT 9666 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | || || |||| |||||| ||||| || || | |||||||| |||||| || || Sbjct 9667 GCGACCCTCCTCCAACTGCTTCCCGGCAAAAATCAACCGCTGCTGATCCGGAGGGATACC 9726 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || ||||||||||| ||| ||| || | |||||| | | || || || | Sbjct 9727 CTCCTTGTCCTGAATCTTGGCCTTTACGTTCTCAATGGTGTCGCTGGCCTCAACCTCAAG 9786 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || || || || ||||| |||||||| || || || Sbjct 9787 AGCAATGGTTTTGCCAGTGAGGGTTTTCACGAAGATCTG 9825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178890997405742