Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1149 102 2e-16 >seq1149 Length=36903 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || ||||| ||||| || ||||| || | || || || Sbjct 9620 ACCAGGTGCAGTGTCGACTCCTTCTGAATGTTGTAGTCCGCAAGCGTGCGACCCTCCTCC 9679 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||| || || || || | || || || || ||||| || || || ||||| ||| Sbjct 9680 AACTGCTTCCCGGCAAAAATCAACCGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGA 9739 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||||||||||||||| || || ||||| | || || || Sbjct 9740 ATCTTGGCCTTTACGTTCTCAATGGTGTCGCTGGCCTCAACCTCAAGAGCAATGGTTTTG 9799 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | ||||| Sbjct 9800 CCAGTGAGGGTTTTCACGAAGATCTGCAT 9828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109452799937942