Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq809 416 4e-111 seq1459 224 1e-53 seq1149 165 1e-35 seq1691 163 4e-35 seq1660 122 1e-22 >seq809 Length=19217 Score = 416 bits (460), Expect = 4e-111 Identities = 1045/1574 (66%), Gaps = 18/1574 (1%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || ||||||||||| | || || || ||||| || |||||||| ||||| || || ||| Sbjct 279 GCCATTGGTATCGACCTCGGTACGACGTACTCGTGCGTTGGTGTGTGGCAGAACGAACGT 338 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || || | |||||||| || |||||||| || || || ||||||||||| || Sbjct 339 GTGGAAATCATTGCAAATGACCAGGGTAACCGTACGACGCCGTCCTACGTTGCCTTCACG 398 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || ||| || || | || ||||| || || || ||| || |||||||||| || Sbjct 399 GACTCTGAGCGCCTGATCGGCGATGCGGCGAAGAACCAGGTGGCGATGAACCCTACGAAC 458 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || || |||||||| || || || || || ||||| || || || || | Sbjct 459 ACGGTGTTCGACGCGAAACGACTGATCGGACGGAAGTTCTCCGACTCTGTCGTGCAGTCC 518 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| | | | || || || | | || ||||| |||| | Sbjct 519 GACATGAAGCACTGGCCCTTCAAGGTCGTCACCAAGGGCGACGACAAGCCAGTGATCCAG 578 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 || | || | |||||||| |||| || ||| || || || || ||||| | Sbjct 579 GTACAGTTCCGCGGTGAGACGAAAACCTTCAATCCTGAGGAGATCAGTTCCATGGTACTA 638 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTT-TCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | |||||||||||| |||||| || | || |||| | | ||| | || || || Sbjct 639 TTGAAGATGAAGGAGGTTGCGGAGTCGTATCTTGGGAAGCAG-GTGGCTAAGGCTGTCGT 697 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || || ||||| ||||||| || || || || ||||| || |||||||| | | || Sbjct 698 AACAGTGCCTGCATACTTCAACGACTCGCAGCGCCAGGCAACGAAGGACGCGGGGACGAT 757 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 ||| ||||| | || | || ||||| || ||||| || ||||||||||| ||||| Sbjct 758 TGCTGGTCTGGAGGTGCTGCGCATCATCAACGAGCCAACGGCTGCTGCAATTGCCTATGG 817 Query 195838 TCTGGACAAG---AACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 ||||||||| | ||| | || || || | ||||| ||||| |||||||| Sbjct 818 CCTGGACAAGGCTGATGAGGGGAAGGAACGCAACGTGCTCATCTTCGATCTTGGTGGTGG 877 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 || || ||||| || | || | ||||| || || || ||||| || || || || Sbjct 878 CACCTTCGATGTGACATTGCTGACGATTGACGGCGGCATCTTCGAGGTGAAAGCCACAAA 937 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGA 196014 |||||| || || || ||||| ||||| ||||| || ||| | ||| || | || Sbjct 938 TGGTGACACCCACCTTGGTGGAGAAGACTTCGACAATCGCCTTGTGGCTCACTTTACCGA 997 Query 196015 TGAGTTCCGTCGAAAGAATAAG---AAAGATATTTC-TGGAAATCCTAGGGCTCTTCGTC 196070 || ||| || ||||| ||| || ||| | || | ||| | | || ||||| | Sbjct 998 GGAATTCAAGCGCAAGAACAAGGGCAAGGATCTCTCATCGAACT-TGCGCGCCCTTCGCC 1056 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGG 196130 | ||| | || || ||||| || ||||| || || || ||||| | || || ||| Sbjct 1057 GCCTTCGTACGGCTTGTGAGCGCGCCAAGCGCACACTTTCTTCCGCTGCGCAGGCAACCA 1116 Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190 | ||||| ||| | | || || ||||||||| | | || ||||||||||| |||| Sbjct 1117 TCGAGATCGATGCACTCTTCGAAAACATTGACTTCCAGGCGACCATTACCCGTGCTCGTT 1176 Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTA-TGGAACCTGTTGAACAAGTACTT 196249 | || || | | ||| || || | || | || |||| || || | || || Sbjct 1177 TCGAGGAACTGTGCGGTGACCTG-TTCCGTGGTACATTGCAACCCGTAGAGCGTGTGCTG 1235 Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309 | || || |||||||| || || | || | ||||| || || || || ||| Sbjct 1236 CAGGATGCCAAGATGGACAAACGCGCCGTGCACGATGTGGTCCTGGTTGGTGGTTCCACC 1295 Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369 ||||| || ||| | ||| | | ||| ||| ||| | || || | ||||| Sbjct 1296 CGTATCCCCAAGGTGATGCAGCTTGTGTCTGACTTTTTCGGTGGCAAGGAGCTTAACAAG 1355 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 | |||||||| || || ||||| || || || || || || || ||| || | | Sbjct 1356 AGCATCAACCCCGACGAGGCAGTGGCCTACGGCGCTGCTGTACAAGCTTTCATCTTGACC 1415 Query 196430 GGTGTTGACAATAA--TAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487 |||| | | | || |||| ||| ||| || || || ||||| || || | | | Sbjct 1416 GGTGGTAAGAGCAAGCAAACG--GAAGGTCTCCTCCTTCTGGATGTCGCCCCGCTTACGC 1473 Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547 | || | || || || ||||| || ||||| | | || | | ||||| || || | Sbjct 1474 TCGGCATCGAGACGGCAGGTGGCGTGATGACGGCACTGATCAAGCGCAACACGACGATCC 1533 Query 196548 CGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTC 196607 | || || ||| ||| |||| || || || || || ||||| || ||||| || |||| Sbjct 1534 CCACCAAAAAGAGCCAAATCTTCTCCACATACTCAGACAATCAGCCCGGTGTGCACATTC 1593 Query 196608 AAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGAT 196666 | || | ||| || || || | || || | ||||| |||||| | || || |||||| Sbjct 1594 AGGTCTTTGAGGGTGAGCG-TACCATGACGAAGGACTGCCATCTCTTGGGCACCTTCGAT 1652 Query 196667 TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATA 196726 | | || || || | |||||| | || || |||||||| | || |||||| || Sbjct 1653 CTCTCTGGAATCCCCCCGGCACCCCGCGGCGTGCCACAGATAGAAGTGACCTTCGACCTA 1712 Query 196727 GACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAG 196786 ||||| ||||| ||||| | ||| | || ||||| |||| ||||||| | || Sbjct 1713 GACGCTAATGGTATTCTTAGCGTTTCTGCGGAGGAGAAGGGCACTGGCAAGCGCAACCAG 1772 Query 196787 ATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAA 196846 ||||| || || || |||||||| || || |||| || || ||||| ||||| Sbjct 1773 ATTGTCATCACAAACGACAAGGGTCGCCTGAGCAAGGCTGATATCGAACGCATGGTGTCT 1832 Query 196847 GATGCGGAAAAGTA 196860 ||||| | ||||| Sbjct 1833 GATGCTGCGAAGTA 1846 >seq1459 Length=76451 Score = 224 bits (248), Expect = 1e-53 Identities = 806/1240 (65%), Gaps = 38/1240 (3%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || || ||| | || || |||||||| || || ||||| | ||||||||| Sbjct 50115 GCGATCGGCATTGATCTTGGCACAACTTACTCGTGCGTGGGTGTGTTCAAAAATGATCAG 50056 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || ||| || | || || || || ||||| ||||| || || || || |||| | Sbjct 50055 GTTGAAATTGTCGCCAACGATCAGGGTAACCGCACAACACCTTCTTATGTGTCCTTCAGT 49996 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | ||| || || ||||| ||||||||||| ||||| || |||||||| | ||| Sbjct 49995 GAAACTGAGCGACTGGTTGGCGATGCCGCAAAGAATCAAGTGGCCATGAACCCAACAAAT 49936 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCC---AA 195535 || || ||||| || ||||| | ||||| || || | | ||| | || || || Sbjct 49935 ACGGTGTTTGATGCCAAGCGAATAATTGGCCGAAAATAT---GATGACCCAGACCTGCAA 49879 Query 195536 GACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATT 195595 | || || || | ||| | | | ||| || | | || | || || | | Sbjct 49878 GCTGACATGAAACATTGGCCCTTT-AAG--GTAACTGTGAAGGAAGGGAAACCGGTTGTG 49822 Query 195596 AATGTTGAATTTCACGGTGAGAAGA-AACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 | || || | || ||||||| || ||| ||| | |||||||| || | ||||| Sbjct 49821 GAGGTAGAGTACCAAGGTGAGAGGAGAACCTTTTTC-CCCGAAGAGATAAGTGCGATGGT 49763 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGT 195714 ||| || |||||||| | |||||||| | | | || | | || | | || || Sbjct 49762 CTTGCAGAAAATGAAGGAAATCGCGGAATCCTACCTTGGCGAGAAGGTATCAAAGGCCGT 49703 Query 195715 TGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGC 195774 |||||||| ||||| || |||| || || ||||| || || ||||| ||||| | | Sbjct 49702 CGTGACTGTGCCTGCGTATTTCAACGACTCGCAACGTCAAGCAACAAAAGACGCGGGATC 49643 Query 195775 TATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTT 195833 ||||| ||||| | || || | || | || ||||||||||| || || ||||| | Sbjct 49642 AATTGCTGGTCTTGAG-GTGTTGCGCATCGTTAACGAACCAACAGCCGCAGCCATTGCGT 49584 Query 195834 ATGGTCTGGACA--AGAAC--AAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 |||| |||||| || | ||||| || || | || | ||||||||||| || Sbjct 49583 ATGGCATGGACAGAAGTTCTGAAGGAGCAATG-AAGACGGTGCTCATCTTTGATCTTGGA 49525 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 ||||| || |||||||| | | || || ||||| ||||| |||| ||||| | ||| Sbjct 49524 GGTGGCACTTTTGATGTGACGTTGCTAAACATTGACGGTGGCTTATTTGAAGTGAGGGCA 49465 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTG 196009 ||||||||||| || ||||| ||||| ||||| || || || ||| | | | || Sbjct 49464 ACTGCTGGTGACACACATCTTGGTGGGGAAGACTTTGACAGCCGCCTTGTGGATTACTTC 49405 Query 196010 TCTGATGAGTTCCG---TCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTT 196066 | ||||||| | || | |||| ||| | |||||| | | || | Sbjct 49404 GCGACTGAGTTCAGAACCCGCACCGGTAAG---GATTTGCGTGGAAACGCACGTGCGATG 49348 Query 196067 CGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC---TTCTAC-GGCTCA 196122 | || | | || ||||| ||||| | || ||||| || || ||| | || | Sbjct 49347 AGGCGTTTGCGTACGGCATGCGAACGGGTGAAGCGAACACTTTCCAGTTCAGCAAGCACC 49288 Query 196123 AACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCG 196182 |||| ||||||||||| | ||| ||| || ||||||| | | | || || || Sbjct 49287 AACA----TTGAGATTGATGCACTGTATGAAGGGTTTGACTTTTTCTCCAAAATAACGCG 49232 Query 196183 TGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACA 196242 || || || || ||| | | ||| || | || | || || | ||| | Sbjct 49231 AGCTCGGTTCGAGGAGATGTGCCGTGACCAATTCGAGCGCTGCCTAGAGCCAG-TGAGGA 49173 Query 196243 A-GTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAG 196301 | || || || || || | ||| || || || || | || ||||| || | Sbjct 49172 AGGTCCTGAAAGATGCCGAGGTTGATGCATCGGCAGTGGACGATGTGGTTCTTGTCGGTG 49113 Query 196302 GATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATT 196361 ||||||| || ||||| | |||||| || | | ||| ||||| || || Sbjct 49112 GATCAACTCGCATTCCCCGCGTGCAACAGTTGGTGCAGAACTTTTTCAACGGCAAGGAGC 49053 Query 196362 TAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTA 196421 ||| | |||||||| ||||| || ||||||||||| || || || || ||| || Sbjct 49052 CGAACCGTTCAATCAACCCTGATGAGGCGGTTGCTTATGGAGCCGCGGTACAAGCTCATA 48993 Query 196422 TTCTCTCAGGTGTTGACAATAA--TAACGTCCAAGATCTTCTGCTACTTGATGTTGCACC 196479 | | || |||| | | ||| |||| |||| ||||| ||| | ||||| | || Sbjct 48992 TCGTATCTGGTGGCAAAAGTAAGCAAACG--AAAGACCTTCTCCTAGTCGATGTGACTCC 48935 Query 196480 CGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACT 196519 | || |||||| ||||||| || |||||||| ||| || Sbjct 48934 GCTTTCACTGGGTGTTGAAACTGCCGGTGGTGTAATGTCT 48895 >seq1149 Length=36903 Score = 165 bits (182), Expect = 1e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||||||||| ||||| ||||| || | || ||||||||| | Sbjct 9828 ATGCAGATCTTCGTGAAAACCCTCACTGGCAAAACCATTGCTCTTGAGGTTGAGGCCAGC 9769 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || ||||||||||| || ||||| || || || || |||||| Sbjct 9768 GACACCATTGAGAACGTAAAGGCCAAGATTCAGGACAAGGAGGGTATCCCTCCGGATCAG 9709 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | |||||||| || || ||| | || || || || || || || || |||||| Sbjct 9708 CAGCGGTTGATTTTTGCCGGGAAGCAGTTGGAGGAGGGTCGCACGCTTGCGGACTACAAC 9649 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 |||| |||||||| || || ||||| || || | ||||| ||||||| Sbjct 9648 ATTCAGAAGGAGTCGACACTGCACCTGGTACTCCGCCTTCGAGGTGGTG 9600 >seq1691 Length=35836 Score = 163 bits (180), Expect = 4e-35 Identities = 259/372 (70%), Gaps = 6/372 (2%) Strand=Plus/Plus Query 195617 AAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACT 195676 |||||||| || | || ||||| || | |||||| || ||||||||||| | | Sbjct 27337 AAGAAACAGTTCACACCAGAAGAGATCAGTGCCATGGTGCTGCAGAAGATGAAGGAAATT 27396 Query 195677 GCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTC 195736 || ||| | | | | || | | |||||| | || ||||| || |||||||| |||||| Sbjct 27397 GCAGAAACGTACCTTGGCGAGAAAGTGAAAAACGCTGTTGTAACGGTACCTGCGTACTTC 27456 Query 195737 AGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTT 195796 | ||| ||||||| ||| |||||||||| |||| | || || ||| | ||| | Sbjct 27457 AATGACGCACAACGGCAGTCGACAAAGGATGCTGGGACCATCGCCGGTTTGAACGTAGTG 27516 Query 195797 AGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGAC 195856 | || |||||||| || || || || || || || ||||| || ||||| | | Sbjct 27517 CGCATCATCAATGAGCCCACCGCAGCCGCCATCGCATATGGGCT------AAACAAAGCC 27570 Query 195857 GAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTC 195916 | || || ||| | || | || ||||| ||||||||||| |||||||| ||||| || Sbjct 27571 GGTGAGAAGAATATCCTGGTGTTCGATCTTGGTGGTGGTACCTTTGATGTGTCACTGCTG 27630 Query 195917 AATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGT 195976 | || || | || | |||||||| ||| || |||||||| || || |||||| Sbjct 27631 ACAATCGATGAGGGCTTCTTCGAAGTTGTGGCGACAAACGGTGATACGCACCTTGGTGGT 27690 Query 195977 GAAGATTTCGAT 195988 || || || ||| Sbjct 27691 GAGGACTTTGAT 27702 Score = 163 bits (180), Expect = 4e-35 Identities = 391/591 (66%), Gaps = 3/591 (1%) Strand=Plus/Plus Query 196283 GAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGC 196342 || ||||| || || || ||||| || ||| | |||||| | ||||| || | | | Sbjct 27997 GAGATTGTGCTCGTTGGTGGATCCACACGTGTGCCGAAGGTACAACAACTGATCAGTGAC 28056 Query 196343 TTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGT 196402 |||||| | || || | ||| || ||||| |||||||| || || |||||| Sbjct 28057 TTCTTCGGTGGGAAGGAACTGAACCGTGGTATTAACCCCGATGAAGCCGTAGCATATGGT 28116 Query 196403 GCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTG 196462 || || || || ||||| | || | |||| | | | || | | || || Sbjct 28117 GCCGCTGTGCAAGCTGCGGTGCTAACCGGTGAAAGCGAGGTTGGCGGGCGCG---TTGTG 28173 Query 196463 CTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAA 196522 || | ||||| || | || || ||| ||||||| | ||||||||| ||||| ||| Sbjct 28174 CTTGTAGATGTGATCCCACTGTCGCTTGGTATTGAAACTGTGGGTGGTGTCATGACAAAA 28233 Query 196523 ATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCC 196582 | || || | |||||| || || || |||||| || |||||||| || || | Sbjct 28234 CTCATCGAGCGTAACACACAGATCCCCACCAAGAAGAGTCAGGTCTTTTCTACCCATGCG 28293 Query 196583 GATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGAT 196642 || || || || ||||| | ||| ||||| ||||| || || ||| | |||||||| Sbjct 28294 GACAACCAGCCGGGTGTGCTTATCCAAGTGTATGAGGGTGAGCGCCAGCTGACAAAGGAT 28353 Query 196643 AACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCA 196702 |||| || || || | ||||| ||| |||| ||||| |||| | | ||||| ||| Sbjct 28354 AACCGCCTCCTGGGCAAATTCGAGTTGTCGGGAATTCCTCCTGCCGCGCGTGGTGTGCCA 28413 Query 196703 CAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGAC 196762 || || | || || || | |||| || | || || | || | ||| |||| Sbjct 28414 CAAATCGAAGTGACATTTGACGTCGACGAGAACAGCATCCTGCAGGTGAGCGCTATGGAC 28473 Query 196763 AAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAG 196822 ||| | ||||| || ||| |||| || ||||| |||||||| || || || Sbjct 28474 AAGTCGTCTGGAAAGAAGGAAGAGATCACCATCACCAACGACAAGGGTCGCCTGAGCGAG 28533 Query 196823 GAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGAC 196873 ||||| ||||| |||||||| | || |||| | ||| | ||| || ||| Sbjct 28534 GAGGAGATTGAGCGTATGGTGCGCGAAGCGGCAGAGTTCGAGGACGAGGAC 28584 >seq1660 Length=18801 Score = 122 bits (134), Expect = 1e-22 Identities = 455/703 (65%), Gaps = 19/703 (3%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || ||||||||||| | || || || ||||| || |||||||| ||||| || || ||| Sbjct 8009 GCCATTGGTATCGACCTCGGTACGACGTACTCGTGCGTTGGTGTGTGGCAGAACGAACGT 7950 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || || | |||||||| || |||||||| || || || |||||||| || Sbjct 7949 GTGGAAATCATTGCAAATGACCAGGGTAACCGTACGACGCCGTCCTACGTTGCTTTCGTC 7890 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 ||||||| ||| ||||| ||||| || || || || | ||| | | | | Sbjct 7889 AATAATGAGGTTCTTGTTGGCGATGCGGCGAAGAACCACGCCGCTCGTGGCTCGAATGGT 7830 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 | | || |||||||| || || || || || ||||| || || || || | Sbjct 7829 GTTATATTCGACGCGAAACGGCTGATCGGACGGAAGTTCTCCGACTCTGTCGTGCAGTCC 7770 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGC----CTATGAT 195594 || || ||| ||||| | | | ||| | | || | | || | | || |||| Sbjct 7769 GACATGAAGCACTGGCCCT-TCAAGGT---CGAGGAGGGCGAGAAAGGTGGTGCTGTGAT 7714 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTC-GTCTATGG 195653 | || || || || ||| || | | ||||| |||| || | | || Sbjct 7713 GAGGGTAGAGCATCTTGGAGAGGGGATGTTACTGCAGCCCGAGCAAATATCTGCCCGTGT 7654 Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTT-TCATGGGTAAAACTGTGAAAGATGCA 195712 ||| || ||||| |||||| || | || |||| | | ||| | || Sbjct 7653 CCTTGCGTACC-TGAAGTCTTGTGCGGAGTCGTATCTTGGGAAGCAG-GTGGCTAAGGCT 7596 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 || || || || ||||| ||||||| || || || || ||||| || |||||||| | Sbjct 7595 GTCGTAACAGTGCCTGCATACTTCAACGACTCGCAGCGCCAGGCAACGAAGGACGCGGGG 7536 Query 195773 GCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCT 195832 | ||||| ||||| | || | || ||||| || ||||| || ||||||||||| Sbjct 7535 ACGATTGCTGGTCTGGAGGTGCTGCGCATCATCAACGAGCCAACGGCTGCTGCAATTGCC 7476 Query 195833 TATGGTCTGGACAAG---AACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 ||||| ||||||||| | ||| | || || || ||| | ||||| | || Sbjct 7475 TATGGCCTGGACAAGGCTGATGAGGGGAAGGAACGCAACGTTTTGGTGTTTGACTTTGGA 7416 Query 195890 GGTGGTACGTTTGATGTCTCACT--TCTCAATATTGAAGGTGGTATATTCGAAGTAAAGG 195947 ||||| |||||||| |||||| | | ||| || || ||| | ||||| || || | Sbjct 7415 GGTGGAACGTTTGACGTCTCAATTATTTCAGTA--AGCGGCGGTGTTTTCGAGGTGAAAG 7358 Query 195948 CTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGC 195990 | || |||||| || || || ||||| || ||| | || || Sbjct 7357 CCACAAATGGTGACACCCACCTTGGTGGAGAGGATGTGGACGC 7315 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || ||||||||||| | || || || ||||| || |||||||| ||||| || || ||| Sbjct 113 GCCATTGGTATCGACCTCGGTACGACGTACTCGTGCGTTGGTGTGTGGCAGAACGAACGT 54 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGC 195411 || || || || | |||||||| || |||||||| || || || |||||||| Sbjct 53 GTGGAAATCATTGCAAATGACCAGGGTAACCGTACGACGCCGTCCTACGTTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657845739634720