Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq67 120 4e-22 >seq67 Length=60658 Score = 120 bits (132), Expect = 4e-22 Identities = 177/251 (71%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 146923 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGC 146982 |||||||| ||||| ||| || || || || || ||||||||||| || || |||||| Sbjct 41095 GGCTCCACATGGTTACTGTAAACATGTGCATCGCCAAGGGTGTGCACCAATTCGCCCGGC 41036 Query 146983 TTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAG 147042 ||| || | | | |||| | | | || ||||| | || || || |||||| Sbjct 41035 CGAAGTCCAGAAGCTTTTGCCATGAGGAATGTAAGCAGTGCATACGAAGCAATATTGAAG 40976 Query 147043 GGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCG 147102 ||||| || || ||||| || | |||| |||||||| | ||| ||||| ||||| | | Sbjct 40975 GGGACGCCAAGACCCATATCACATGACCGCTGGTACAACATGCATGAGAGTTCCCCATTG 40916 Query 147103 GCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCG 147162 |||||| || || || |||||||| || || ||||||||| |||| | | || Sbjct 40915 CTCACGTAGAATTGCGCCATCATGTGGCATGGTGGGAGCGCCATGCGTGGCAAGGCGGCC 40856 Query 147163 GGGTTCCAGGC 147173 || ||||| || Sbjct 40855 GGATTCCAAGC 40845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583473223166400