Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20equiperdum_20[genbank_20GCA_5F001457755.2_202016-12- 15] 2,026 sequences; 26,228,029 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1149 107 2e-18 >seq1149 Length=36903 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || || | || || | || |||| |||||| || ||||| Sbjct 9637 CTCCTTCTGAATGTTGTAGTCCGCAAGCGTGCGACCCTCCTCCAACTGCTTCCCGGCAAA 9696 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||||||||||||| |||| ||| | | |||||||||| ||||| ||| | | Sbjct 9697 AATCAACCGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGAATCTTGGCCTTTACGTT 9756 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | | || ||||| || || | |||||||| Sbjct 9757 CTCAATGGTGTCGCTGGCCTCAACCTCAAGAGCAATGGTTTTGCCAGTGAGGGTTTTCAC 9816 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 9817 GAAGATCTGCAT 9828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450782183652080