Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq137 95.1 1e-14 >seq137 Length=29121 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | |||| || || ||||| || || || ||||||||| Sbjct 22738 CCACCACGGAGACGGAGCACAAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCCGCC 22679 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || || ||||| ||||| ||| | || || |||||||||||| || Sbjct 22678 AGCGTGCGGCCCTCTTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGCGGG 22619 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| ||||| | | | || |||| | |||| Sbjct 22618 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTCTCAATGGTGTCACTAGCCTCCACC 22559 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | | || |||||||| || | ||| || ||||| || ||||| || Sbjct 22558 TCGAGCGCGATCGTCTTGCCCGTCAGCGTCTTCACAAAGATCTGCATATT 22509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422244425018636