Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq62 87.8 4e-12 >seq62 Length=39022 Score = 87.8 bits (96), Expect = 4e-12 Identities = 179/266 (67%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| ||||||||||| || ||||| | ||| ||| || || || ||| || || Sbjct 15620 TGAACGTGGATGCCGATACCACCAGCCGATTTGCTGATTATGGCGCACTGCTTTAGGGTG 15679 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || || || ||||||||||| ||||| | | | | ||||||||| ||| | || Sbjct 15680 TCGTAGATGCCCTCAATGCTGTCATCCCGCATTGCAACAAGGAAGCAAGAGCTCATCTGT 15739 Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953 ||| ||| ||| || |||||||| || | || || ||||| || ||| Sbjct 15740 GGTACTGGTGTGCCAGCGTTGAACAGTGTCGGTGTTGCGTGCGTAAAGAAGCCAAGAGAC 15799 Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACA 95013 || ||| |||||||| | || || ||||| | |||||||| |||| || ||| Sbjct 15800 ATATAATCGTATGTTTCCTTCACGTGTTGCATGTCAGCACCGTGAATACCGATGGCAACA 15859 Query 95014 CGCATAATCATGTCCTGAGGGCGCTC 95039 || | || ||| | ||| ||||| || Sbjct 15860 CGAAGAAACATATGCTGTGGGCGTTC 15885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989547598461805