Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq212 96.9 5e-15 >seq212 Length=23277 Score = 96.9 bits (106), Expect = 5e-15 Identities = 105/138 (76%), Gaps = 5/138 (4%) Strand=Plus/Minus Query 77352 GCCGG--GCACCAGCAGGGTGGAGTAGCACAGGTTGTGGGCCATGATGATGGAGGGGTAG 77409 ||||| |||||||| || |||||||||||||| ||||| ||||| ||||| ||||| Sbjct 9180 GCCGGCCGCACCAGC---GTCGAGTAGCACAGGTTATGGGCGATGATAATGGATGGGTAC 9124 Query 77410 AGGCTGGCGAAGTCGAAGACCGCCACGGGGTCGTTGTAGTAGCCCACCACGGGCTCGAAG 77469 || ||||| |||| || | |||| ||||||| ||||| ||| || || | | Sbjct 9123 AGTGACGCGAAATCGAGTGTGGCGATGGGGCAGTTGTAGAAGCCCTTCACTGGTTCAATG 9064 Query 77470 ACGGTGGCACCCTGGTAG 77487 ||||||||||||| |||| Sbjct 9063 ACGGTGGCACCCTCGTAG 9046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771322718162520