Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq137 122 2e-22 >seq137 Length=29121 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| ||||| ||||| | || || | || ||||| || || || || Sbjct 22708 GTCGATTCCTTCTGGATATTGTAGTCCGCCAGCGTGCGGCCCTCTTCGAGCTGCTTGCCG 22649 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || || || || || || || || ||||||||||| || || Sbjct 22648 GCAAAGATCAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTC 22589 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| || |||| || ||||| || | || ||||| || || || || Sbjct 22588 ACGTTCTCAATGGTGTCACTAGCCTCCACCTCGAGCGCGATCGTCTTGCCCGTCAGCGTC 22529 Query 104543 TTTACAAATATCTGCATTTT 104562 || ||||| |||||||| || Sbjct 22528 TTCACAAAGATCTGCATATT 22509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151356046169668