Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq828 91.5 2e-13 >seq828 Length=7585 Score = 91.5 bits (100), Expect = 2e-13 Identities = 143/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 126180 GGTGTAAATGTAGCGGGGAGCTGCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239 |||| | ||||| ||| || || |||||||| |||| || ||| || |||||||| Sbjct 5235 GGTGAAGATGTAACGGCCCGCAGCGTGGTCCTTGCCGCCCTGCAGCCGTGTACCAAACTG 5176 Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGAC 126299 ||||||| ||| | || | ||||||| || | ||||| ||||| || || | || Sbjct 5175 ACCGTCCTGCTGGAGCAGCGGCACATTATTCGAGCCCACGAAGTCTTGTGCGAGGCCAAC 5116 Query 126300 AATGGTCTCGCAC-AGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGC 126358 ||||||| |||| || |||||||||||| | ||| | | ||||| | ||||| | Sbjct 5115 GATGGTCT-GCACCAGCGACTGCTCGCCGTGGTGGTACGCCGCGTGCTCAGAGACGTAAC 5057 Query 126359 CGCTCAGCTGCGCAACCTTGAT 126380 || || ||| | ||||| || Sbjct 5056 CGGCTAGTTGCACCACCTTAAT 5035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611370058669600