Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq137 102 7e-17 >seq137 Length=29121 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || | ||| | |||| |||||| | | Sbjct 22512 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCGCGCTCGAGGTGGAGGCTAGT 22571 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| ||||| | || | ||| ||||| || || || || || ||||| Sbjct 22572 GACACCATTGAGAACGTGAAGGCGAAGATTCAG-GACAAGGAGGGCATCCCGCCGGACCA 22630 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||||||||| || | ||||| | ||||| ||| || ||||| Sbjct 22631 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAAGAGGGCCGCACGCTGGCGGACTACAA 22690 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || ||||| ||||| || | ||||| Sbjct 22691 TATCCAGAAGGAATCGACGCTGCACCTTGTGCT 22723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433312837717865