Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq464 87.8 4e-12 >seq464 Length=13466 Score = 87.8 bits (96), Expect = 4e-12 Identities = 121/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 297430 CAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACC 297489 |||||||||||| || || |||| ||| || || |||||| ||||| | |||||| Sbjct 1519 CAGTTTTGTGAAGATGTAGCGTGGGGCCGCATGGTCGTTACCAACCTGCTGACGCGAACC 1578 Query 297490 GAACTGGCCCTCCGGCAACAACCA-GTTGATGTTATTGCTTCCGACATAATCCTGTGCAA 297548 |||||| ||||||||| |||| || ||||||||| || | || | | |||||| | Sbjct 1579 GAACTGACCCTCCGGC-ACAAGCAGGTTGATGTTGTTACCACCCGTGAAGTTCTGTGCCA 1637 Query 297549 GGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCG 297595 || | || ||| | ||||| || | || |||||||| ||||| Sbjct 1638 TTTTAATCATCGTCTCCTGCAGCGAGACCTCACCATGGTGGAAGGCG 1684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102839430903850