Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq137 109 5e-19 >seq137 Length=29121 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | ||||||||| || || || ||||| || || | ||||| | ||| Sbjct 22723 AGCACAAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCCGCCAGCGTGCGGCCCTCT 22664 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||||||| | || |||| ||||||||| || || || || || || || Sbjct 22663 TCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 22604 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || ||| | || |||| || ||||| || | | | ||| Sbjct 22603 TGAATCTTCGCCTTCACGTTCTCAATGGTGTCACTAGCCTCCACCTCGAGCGCGATCGTC 22544 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| |||| || || || || || ||||| || Sbjct 22543 TTGCCCGTCAGCGTCTTCACAAAGATCTGCATATT 22509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499626868997240