Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq188 91.5 2e-13 >seq188 Length=24672 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAG 153266 || ||||| || ||||| | ||||||| || || ||||||| || ||||| |||| Sbjct 5945 ATTGGTCAGGGGTACTACGAGTCCATTACTCCTCCTGTCATACTTCGCAACGTCATTGAA 5886 Query 153267 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 153326 |||||| | ||||||||| | ||||| || || ||||||||||| | || ||| | || Sbjct 5885 AATCCTGGATGGTACACACCCTACACACCATACCAAGCTGAGATTGCACAAGGACGTCTG 5826 Query 153327 GAAGCTTTATTCAATTACCAAAC 153349 || | | || |||| |||||| Sbjct 5825 GAGTCCCTTTTGAATTTCCAAAC 5803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579192013500640