Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq188 87.8 2e-12 >seq188 Length=24672 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAG 157941 || ||||| || ||||| | |||| || || || ||||||| || ||||| |||| Sbjct 5945 ATTGGTCAGGGGTACTACGAGTCCATTACTCCTCCTGTCATACTTCGCAACGTCATTGAA 5886 Query 157942 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 158001 |||||| | ||||||||| | ||||| || || ||||||||||| | || ||| | || Sbjct 5885 AATCCTGGATGGTACACACCCTACACACCATACCAAGCTGAGATTGCACAAGGACGTCTG 5826 Query 158002 GAAGCTTTATTCAATTACCAAAC 158024 || | | || |||| |||||| Sbjct 5825 GAGTCCCTTTTGAATTTCCAAAC 5803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588030096312560