Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq188 91.5 2e-13 >seq188 Length=24672 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 139938 GTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTG 139997 |||||| |||| || | | |||| | ||| || | ||||||||||| || || ||| Sbjct 5803 GTTTGGAAATTCAAAAGGGACTCCAGACGTCCTTGTGCAATCTCAGCTTGGTATGGTGTG 5862 Query 139998 TAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATG 140057 || | ||||||||| | |||||| |||| ||||| || ||||||| || || |||||| Sbjct 5863 TAGGGTGTGTACCATCCAGGATTTTCAATGACGTTGCGAAGTATGACAGGAGGAGTAATG 5922 Query 140058 GTTCCATAGTATCCTTGACCTAT 140080 | | ||||| || ||||| || Sbjct 5923 GACTCGTAGTACCCCTGACCAAT 5945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578977621194920