Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq137 87.8 2e-12 >seq137 Length=29121 Score = 87.8 bits (96), Expect = 2e-12 Identities = 165/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| || || || || || ||||||| || || || | Sbjct 22512 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCGCGCTCGAGGTGGAGGCTAGT 22571 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || || || Sbjct 22572 GACACCATTGAGAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAG 22631 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||||| || ||||| || || | | || | || || || Sbjct 22632 CAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAAGAGGGCCGCACGCTGGCGGACTACAAT 22691 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943 || || ||||||||||| || ||| | ||| | || | || || || | | ||||| Sbjct 22692 ATCCAGAAGGAATCGACGCTGCACCTTGTGCTCCGTCTCCGTGGTGGTGTGATGGAGCCG 22751 Query 24944 ACG 24946 ||| Sbjct 22752 ACG 22754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449881454299880