Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq137 102 5e-17 >seq137 Length=29121 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| || || ||||||| || |||| | || || || ||||| ||||| ||| Sbjct 22702 TCCTTCTGGATATTGTAGTCCGCCAGCGTGCGGCCCTCTTCGAGCTGCTTGCCGGCAAAG 22643 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| | |||||||| |||| | ||||||||||| | || || || ||| Sbjct 22642 ATCAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTC 22583 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | ||||| || || | | || ||||| ||||| || ||||| ||| Sbjct 22582 TCAATGGTGTCACTAGCCTCCACCTCGAGCGCGATCGTCTTGCCCGTCAGCGTCTTCACA 22523 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 22522 AAGATCTGCAT 22512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325681403907149