Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq137 134 3e-26 >seq137 Length=29121 Score = 134 bits (148), Expect = 3e-26 Identities = 166/226 (73%), Gaps = 1/226 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | |||||| || ||||| ||||| ||||| || || | || | | || Sbjct 22727 ACGGAGCACAAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCCGCCAGCGTGCGGCC 22668 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| || || || || |||||||| || || || || || || || || || ||||| Sbjct 22667 CTCTTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTT 22608 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || |||||||| || || || || ||||| || ||| ||| || || || | | || Sbjct 22607 GTCCTGAATCTTCGCCTTCACGTTCTCAATGGTGTCACTAGCCTCCACCTCGAGCGCGAT 22548 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATTT 82820 ||||||||| |||| |||||| ||||| ||||||| |||| | ||| Sbjct 22547 CGTCTTGCCCGTCAGCGTCTTCACAAAGATCTGCA-TATTTTTTTT 22503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981791083793269