Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq62 89.7 1e-12 >seq62 Length=39022 Score = 89.7 bits (98), Expect = 1e-12 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 113001 AACTCTCTACTGTTGGCACCAATGCCTACAGCTTCGACTGCACAGATTCTCGGTAATAAT 113060 |||||||| ||| | ||||||||||| || || || || | |||||||| || ||||| Sbjct 14592 AACTCTCTGCTGGTAGCACCAATGCCAACCGCGTCAACCTCGCAGATTCTTGGCAATAAC 14533 Query 113061 GAATGTTTCGAGCCAATTACAAGTAATATTTATGTCCGACGTGTTCT-AGCAGGTGAGTT 113119 ||||| ||||||||| | ||| || || ||||| || || || || ||| |||||||| Sbjct 14532 GAATGCTTCGAGCCATTCACATCGAACATCTATGTTCGTCGCGTGCTGAGC-GGTGAGTT 14474 Query 113120 TGTACTTTGTAATAAATATCT 113140 || |||||| ||||| Sbjct 14473 CCCTGTTGTTAATAAGTATCT 14453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186769143462031