Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq137 93.3 4e-14 >seq137 Length=29121 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || ||||||||||| || |||| | ||||||||||| || || Sbjct 22709 CGTCGATTCCTTCTGGATATTGTAGTCCGCCAGCGTGCGGCCCTCTTCGAGCTGCTTGCC 22650 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | || || | ||| || |||||||| | ||||| || || ||||| || Sbjct 22649 GGCAAAGATCAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCTT 22590 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | | || | ||||| | || || || || || | || | ||||||||||| || Sbjct 22589 CACGTTCTCAATGGTGTCACTAGCCTCCACCTCGAGCGCGATCGTCTTGCCCGTCAGCGT 22530 Query 27230 TTTCACAAAGATTTGCATA 27248 ||||||||||| |||||| Sbjct 22529 CTTCACAAAGATCTGCATA 22511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424919531412552