Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq137 152 1e-31 >seq137 Length=29121 Score = 152 bits (168), Expect = 1e-31 Identities = 165/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || || || || || ||||| || || ||||| || || | || ||| Sbjct 22723 AGCACAAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCCGCCAGCGTGCGGCCCTCT 22664 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || | || ||||| || || | || ||||||||| Sbjct 22663 TCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 22604 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCA-GAGCTTTCAACCTCGAGAGTGATCGT 211081 || ||||| |||||||| || ||||||||| ||| || |||||||| | |||||| Sbjct 22603 TGAATCTTCGCCTTCACGTTCTCAATGGTGTCACTAGC-CTCCACCTCGAGCGCGATCGT 22545 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||| ||||| || ||||| ||||| | |||||| || Sbjct 22544 CTTGCCCGTCAGCGTCTTCACAAAGATCTGCATATT 22509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159109360955915