Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20grayi_20[genbank_20GCA_5F000691245.1_202014-05-15] 2,871 sequences; 20,934,132 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq137 91.5 1e-13 >seq137 Length=29121 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || ||||| || || || || || || | || || ||||| ||||| ||||| Sbjct 22702 TCCTTCTGGATATTGTAGTCCGCCAGCGTGCGGCCCTCTTCGAGCTGCTTGCCGGCAAAG 22643 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || || | ||||||||| | || | || ||| |||||| || ||| || | || Sbjct 22642 ATCAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTC 22583 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | | || || || | |||||| || | || ||| | || ||||||||||| || ||| Sbjct 22582 TCAATGGTGTCACTAGCCTCCACCTCGAGCGCGATCGTCTTGCCCGTCAGCGTCTTCACA 22523 Query 39274 AAGATTTGCATCTTT 39288 ||||| ||||| ||| Sbjct 22522 AAGATCTGCATATTT 22508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429530570065223