Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trypanosoma_20theileri_20[genbank_20GCA_5F002087225.1_202017-04-12]
319 sequences; 29,822,211 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq244 136 3e-27
>seq244
Length=386007
Score = 136 bits (150), Expect = 3e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||||||| ||||||||||||||||||||| ||| ||| | || |||
Sbjct 42342 ACCAGGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCCGCCAGGGTGCGGCCCTCCTCC 42283
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || || | |||||||| || || || | ||||||||||||| |
Sbjct 42282 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATACCCTCCTTGTCCTGA 42223
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| ||| ||| || | | || |||| | |||||||||| | || ||| ||||||
Sbjct 42222 ATCTTTGCCTTCACATTCTCAACAGTGTCGCTGGCCTCCACCTCGAGGGCAATGGTCTTG 42163
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCC 45342
|| |||| ||||| || ||||| ||||| ||||
Sbjct 42162 CCTGTCAATGTCTTTACGAAGATCTGCATAATGCC 42128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395073664021699
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |