Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20theileri_20[genbank_20GCA_5F002087225.1_202017-04-12] 319 sequences; 29,822,211 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq166 96.9 5e-15 >seq166 Length=457962 Score = 96.9 bits (106), Expect = 5e-15 Identities = 116/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 98716 TGGTTACATTGCGGAACAAACTGATTATAAACACGGTGAACAAAACCTTTGTG-AAACAA 98774 ||||||| || | ||||| | | |||| | || || |||||| | || || |||| | Sbjct 232534 TGGTTACGTTTCTGAACATGCCGCTTATCATCATGGAGAACAAT-CATTAGTACAAACTA 232476 Query 98775 TAATAAAATTTGCACAAGATTTTGTGGGTACAAATAATATAACACTACTTGAGCCAGATG 98834 || || ||| |||||||||| |||||| |||||||| || ||||| | | | ||||| Sbjct 232475 TAGTAGGATTAGCACAAGATTATGTGGGATCAAATAATTTACCACTATTACAACAAGATG 232416 Query 98835 GTCAGTTTGGTACCAGACTTGAAGGAGGTAAAGAT 98869 |||| |||||||| | | |||||||||||||| Sbjct 232415 GTCAATTTGGTACACGTTTGCAAGGAGGTAAAGAT 232381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658400574617240