Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20theileri_20[genbank_20GCA_5F002087225.1_202017-04-12] 319 sequences; 29,822,211 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq193 435 4e-117 seq133 396 3e-105 seq22 251 9e-62 seq244 145 1e-29 seq297 107 3e-18 seq286 95.1 2e-14 >seq193 Length=2144 Score = 435 bits (482), Expect = 4e-117 Identities = 1034/1556 (66%), Gaps = 16/1556 (1%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 ||| || ||||| || | || || || ||||| || || ||||| ||||| || || || Sbjct 337 AGCGATCGGTATTGACCTCGGCACAACGTACTCGTGCGTGGGTGTGTGGCAGAACGAGCG 396 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||| ||||| || | ||||| ||||||||||| || || || |||||||| || ||||| Sbjct 397 TGTGGAGATCATTGCCAATGATCAAGGAAACCGCACGACACCGTCGTACGTGGCGTTTAC 456 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 || | || || || |||| || || || || || ||| || |||||||| | ||| Sbjct 457 CGACACGGAGCGCCTGATTGGTGACGCGGCGAAGAACCAGGTGGCGATGAACCCAACCAA 516 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 || || || ||||||||||| || |||||||||||||| || | || || | Sbjct 517 CACCGTTTTCGACGCGAAGCGCCTCATTGGTCGCAAGTTCAGCGACCCGGTGGTGCAGGC 576 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCC--GGTGTGGCTGATAAGCCTATGATT 195595 || || ||| ||||| | | | ||| || || | | ||| | || |||||| |||| Sbjct 577 GGACATGAAGCACTGGCCCT-TCAAGGTGGTCACAAAGGGTGAC-GACAAGCCTGTGATC 634 Query 195596 AATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTG 195655 | || || || | ||| |||| || || || || || || ||||||||| Sbjct 635 CAGGTGGAGTTCCGCGGCGAGACCAAGACGTTCAACCCGGAGGAGATCAGCTCTATGGTG 694 Query 195656 TTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTT 195715 |||| |||||||||||| ||||| || | | | || || ||||| | || || Sbjct 695 CTGATGAAGATGAAGGAGGTGGCGGAGTCGTACCTTGGCAAGCAGGTGAAGAAGGCGGTG 754 Query 195716 GTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCT 195775 ||||| || || || ||||||| ||||| || ||||||||||||||||| || | | Sbjct 755 GTGACGGTTCCGGCGTACTTCAACGATTCGCAGCGACAGGCGACAAAGGATGCCGGCACG 814 Query 195776 ATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835 ||||| ||||| | || | || ||||| ||||| ||||| ||||| || || ||| Sbjct 815 ATTGCCGGTCTGGAGGTGCTGCGCATCATCAACGAACCGACAGCTGCTGCCATCGCGTAT 874 Query 195836 GGTCTGGACAAGAACAAGGA---CGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGT 195892 |||||||||||| |||| | | || || || | ||||| || || || ||| Sbjct 875 GGTCTGGACAAGGTGGAGGATGGCAAGGAGCGCAACGTGCTCATCTTCGACCTTGGCGGT 934 Query 195893 GGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACT 195952 || || |||||||| | || |||| || || |||||||| || || || ||||| || Sbjct 935 GGCACCTTTGATGTGACTCTGCTCACGATCGACGGTGGTATCTTTGAGGTGAAGGCGACG 994 Query 195953 GCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCT 196012 |||||| || || || |||||||| || ||||| || ||| | || || || Sbjct 995 AATGGTGACACGCACCTTGGTGGTGAGGACTTCGACAACCGCCTTGTGTCCCACTTCACT 1054 Query 196013 GATGAGTTCCGTCGAAAGAATAAG---AAAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069 || |||||| || ||||| ||| || || | | | | | || || ||| Sbjct 1055 GACGAGTTCAAGCGCAAGAACAAGGGCAAGGACCTGACCACCAGCCAACGCGCACTGCGT 1114 Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATG 196129 || || | || || || || || ||||| || || || |||||| |||| || ||| Sbjct 1115 CGTCTCCGCACAGCCTGCGAGCGCGCCAAGCGCACCCTGTCTTCTGCGGCACAGGCAACC 1174 Query 196130 GTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGT 196189 |||| |||||| | | || ||| | |||||| | |||| || |||||||| ||| Sbjct 1175 ATTGAAATTGATGCACTCTTCGACAATGTGGACTTCCAGGCAACCATCACCCGTGCGCGT 1234 Query 196190 TTTGAAGAGTTAAACTCTGATTTGTT---TAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 ||||| || | | ||| | || | | | | || | || || || | || Sbjct 1235 TTTGAGGAACTGTGCGGTGACCTCTTCCGTGGCACG---CTGCAGCCGGTGGAGCGTGTG 1291 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || | ||||| |||||||| ||| || | || |||| || || || || || Sbjct 1292 CTGCAGGACGCCAAGATGGACAAGCGCGCCGTGCACGACGTTGTGCTGGTTGGCGGCTCC 1351 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 || || || || ||| | ||| || | || ||||||| || || | || Sbjct 1352 ACGCGCATCCCCAAGGTGATGCAGCTGGTGTCCGACTTCTTCGGCGGCAAGGAGCTGAAT 1411 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 || | |||||||| || || || ||||| || ||||| || || ||||| || || Sbjct 1412 AAGAGCATCAACCCCGACGAGGCTGTTGCGTACGGTGCCGCGGTGCAGGCCTTCATCCTG 1471 Query 196427 TCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCC 196486 |||||| | | || | | | ||| || || || || || | || | | Sbjct 1472 ACAGGTGGCAAGAGCAAGCAGACGGAGGGTCTGCTTCTGCTCGACGTGACGCCGCTGACA 1531 Query 196487 CTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATT 196546 || ||| |||| ||||| ||||| || ||||| | | || | | ||||| || || Sbjct 1532 CTTGGTATTGAGACAGCTGGTGGCGTCATGACCGCACTGATCAAGCGCAACACGACGATC 1591 Query 196547 CCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATT 196606 ||||| |||||| || |||| || |||||| | || || || || ||||| || || Sbjct 1592 CCGACAAAGAAGAGCCAGATCTTCTCCACGTATGCGGACAACCAGCCGGGTGTGCACATC 1651 Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGAT 196666 || || | ||| || || ||| || ||||||| |||||| || || || || || Sbjct 1652 CAGGTGTTTGAGGGCGAGCGCGCCATGACAAAGGACTGCCATCTGCTCGGCACCTTTGAC 1711 Query 196667 TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATA 196726 || | || || ||| | || || | ||||| || ||||| | || ||| || | Sbjct 1712 CTGTCCGGCATCCCACCGGCTCCGCGTGGTGTGCCGCAGATCGAGGTGACCTTTGACCTC 1771 Query 196727 GACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAG 196786 ||||| || || ||||| ||||| | || ||||| |||| |||| || | || Sbjct 1772 GACGCCAACGGCATTCTGAACGTGTCTGCGGAGGAGAAGGGCACTGGTAAGCGCAACCAG 1831 Query 196787 ATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGT 196842 ||||| || || || |||||||| || || ||| || ||||| || ||||| Sbjct 1832 ATTGTCATCACGAACGACAAGGGACGTCTCAGCAAGTCCGACATTGAGCGCATGGT 1887 >seq133 Length=495741 Score = 396 bits (438), Expect = 3e-105 Identities = 904/1345 (67%), Gaps = 34/1345 (3%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 ||||||||||| ||| | || || || || || ||||||||||| | | ||||| | Sbjct 161131 GCTATTGGTATTGATCTTGGCACAACCTATTCTTGTGTTGGTGTCTTCAAGAATGACCAA 161072 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| | ||||| ||||||||||| ||||| || || || || || |||||| Sbjct 161071 GTGGAGATCATCGCTAATGATCAAGGAAACCGCACAACACCTTCATATGTGGCGTTTACA 161012 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || ||||| ||||| ||||||||||| ||||| || ||||| || | ||| Sbjct 161011 GAGACAGAGCGTCTTGTTGGTGATGCCGCAAAGAATCAAGTGGCAATGAATCCAACCAAC 160952 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || |||||||| ||||| ||| | ||||||||||||||| ||| | | || Sbjct 160951 ACAGTCTTTGATGCGAAACGTATGATTGGTCGCAAGTTTGATGATCCTGATTTGCAGTCT 160892 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 ||||| ||| ||||| | | | ||| ||| | | | | || ||||| || | | Sbjct 160891 GATATGAAGCACTGGCCCTTT-AAG--GTTACAGTTCGAGATGGAAAGCCAGTGGTACAG 160835 Query 195599 GTTGAATTTCACGGTGAGAAGAA-ACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || || | ||| || |||| || ||| | | | || || ||||| | ||||| | Sbjct 160834 GTGGAGTATCAAGGCGAGACCAAGACATTCTTC-CCAGAGGAAATCAGTGCGATGGTTCT 160776 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | || |||||||| | || ||| | | || ||| | | || || | || || || Sbjct 160775 GGGAAAAATGAAGGAAATAGCAGAAGCATATATTGGTCTACCCGTAAAGAAGGCGGTGGT 160716 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 ||| || || || ||||| | |||||| || |||||||| |||||||| |||| |||||| Sbjct 160715 GACAGTTCCCGCATACTTTAATGATTCGCAGCGACAGGCTACAAAGGATGCTGGTGCTAT 160656 Query 195778 TGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 ||| ||| | | ||| ||| | ||||| ||||| |||||||| ||||| ||||| || | Sbjct 160655 TGCTGGTTTGGA-TGTGTTACGTATTATTAATGAGCCAACAGCTGCTGCCATTGCCTACG 160597 Query 195837 GTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTG---ATCTTTGATCTCGGTGGTG 195893 || |||| ||||| | || | | |||| || | ||||||||||| ||||||| Sbjct 160596 GTATGGATAAGAAAACAGATAAGGGAGAAAAGGTGGTCCTTATCTTTGATCTTGGTGGTG 160537 Query 195894 GTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTG 195953 |||| |||||||| | | |||| |||||| |||||||| || ||||| ||||| || | Sbjct 160536 GTACCTTTGATGTAACTTTACTCACTATTGATGGTGGTATTTTTGAAGTGAAGGCAACGG 160477 Query 195954 CTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTG 196013 | || ||||| || | |||||||||||||| ||| || ||| | | | || || Sbjct 160476 CGGGAGATACCCACTTGGGTGGTGAAGATTTTGATAATCGCCTTGTGGATTACTTCGCTA 160417 Query 196014 ATGAGTTCCGTCGAAAGAATAAG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCG 196071 ||||| || | | | |||||| | ||||||| | | ||| | || || Sbjct 160416 CGGAGTT--TAAGACACGTTTTGGAAAAGATGTACGTGGAAATGCACGAGCTGTGCGACG 160359 Query 196072 GCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC---TTCTACGGCTCAA-ACAA 196127 || | || |||||||| |||| || ||||| ||||| |||| | ||| | | Sbjct 160358 TCTGCGAACGGCATGTGAGCGTGTGAAGCGAACACTCTCCAGTTCTTC----CAATGCTA 160303 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 || || |||||| | || | ||| ||| ||| ||| ||| ||||| ||||| | Sbjct 160302 CTGTGGAAATTGATGCCTTATATGATGGATGTGATCTCTTCTCAAAGATTACACGTGCTC 160243 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 |||||||||| | |||| ||| | || | ||||| || || | || Sbjct 160242 GTTTTGAAGAAATGTGTCGTGATCAATTTGAGCGTTGCCTTGAACCAGTGAAAAAGGTTT 160183 Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307 | | || | ||||| | | ||| | || | || | || || ||||| | Sbjct 160182 TGCAGGATTCGGGTATGGAAGCACGTGATGTTCACGATGTGGTGTTGGTTGGTGGATCCA 160123 Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACA 196367 | |||||||| |||||||| || || | |||||| ||||| || | Sbjct 160122 CTCGTATTCCACGTATTCAACAAATTGTTCAGAACTTCTTTGGAGGTAAAG----AACCC 160067 Query 196368 AAACG----ATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATT 196423 || || || || || ||||| || || ||||||||||| ||||| ||||| |||| Sbjct 160066 AATCGTTCTATTAATCCTGATGAGGCTGTGGCTTATGGTGCCGCCGTACAGGCACATATT 160007 Query 196424 CTCTCAGGTGTTGAC--AATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCG 196481 ||||| |||| ||| | | || ||| |||||| |||| ||||| |||| Sbjct 160006 CTCTCTGGTG--GACGTTCTGAAAAGACTGAAGGACTTCTGTTACTGGATGTAACACCTC 159949 Query 196482 TATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAA 196541 | || || ||| | ||||| || || || |||||| || ||||| | | ||| | | Sbjct 159948 TTTCTCTTGGTGTGGAAACTGCTGGAGGAGTTATGTCTGTTCTTATTCCTCGTAACTCTA 159889 Query 196542 CTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTC 196601 || | || | | | || || | || || || || | |||||||| | | ||| Sbjct 159888 CTGTGCCTATTCAAAAATCGCAGATATTCTCTACCAATGCTGATAATCAGCGAAATGTGG 159829 Query 196602 ATATTCAAGTATATGAAGGAGAACG 196626 | ||| | || |||||||| ||||| Sbjct 159828 AGATTAAGGTGTATGAAGGTGAACG 159804 >seq22 Length=626277 Score = 251 bits (278), Expect = 9e-62 Identities = 928/1433 (65%), Gaps = 58/1433 (4%) Strand=Plus/Minus Query 77981 GGTATTCATGGAAATGATATTCCAGCG-GTACTTGAAACGTATGATAAAATGTCCAATGG 78039 |||||||||||| | ||| || | || ||| ||||| |||||| |||||| || Sbjct 348062 GGTATTCATGGAGAAGAT-TTGAAACGTGTAAAGGAAACATATGATTTAATGTCTCTGGG 348004 Query 78040 TATGTTTATTCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTC 78099 | |||| || || || || || || ||||| | ||||| || ||||| ||| Sbjct 348003 ATTTTTTACACATGCCACTCCAACCTTATTTAACTCTGGTACACCATACCCACAAATGAG 347944 Query 78100 ATCTTGTTTCCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCAC 78159 || |||||||| |||||| | || || |||| | || || || | || || | Sbjct 347943 TTCATGTTTCCTTGTTGCAATGCAAGAAGATAGTATTGAGGGAATTTATGATACACTTAA 347884 Query 78160 AGAGTGTGCTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCG 78219 | |||||||| || ||| |||||||||||| ||| ||||| |||| || |||| Sbjct 347883 ACAGTGTGCTATTATCAGTAAAATGGCTGGTGGTATTGGTGTTCATGTTCATAATATTCG 347824 Query 78220 ---TGCAAACAAGTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTAT 78276 ||| |||| ||| |||||| ||||| || ||||| || | || || Sbjct 347823 CTCTGCTGG-AAGTTAT--ATTGCAGGAACGAATGGAACATCAAATGGACTTGTACCGAT 347767 Query 78277 GCTTAGGGTATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTA---GGAAGGG 78333 |||| | || | ||| ||||| || ||||| | |||| ||| ||| | ||||| Sbjct 347766 GCTTCGTGTGTGGAATAACACAGCTCGTTATGTAGATCAAGGTGGTGGTAAACGCAAGGG 347707 Query 78334 GTCATTCGCTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCG 78393 | || ||| | || |||||||||||||| | ||| |||||| |||||| Sbjct 347706 TGCGTTTGCTGTTTATCTTGAACCTTGGCATGGAGAT-------ATTTTT---AACTTCC 347657 Query 78394 TCTCAACCAGGGTGACGAG-------GAAGCTCGA--TGCAGG-GATTTATTCACTGCTA 78443 ||| | | | || | |||| || | |||| | || | || ||| Sbjct 347656 TCTTACTAAAGAAGAATACTGGAAAAGAAGATCAACGTGCACGTGACCTCTTTTATGCCC 347597 Query 78444 TGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGGTAAATGGTCTCTTTTCT 78503 |||||||||| ||| | || ||| | | || || || | | ||| ||| | ||| | Sbjct 347596 TGTGGATTCCTGATTTATTCATGGAACGTGTGGAAAAACGTGATAAGTGGACACTTATGG 347537 Query 78504 GTCCAGATAAGACTAAGGGTCTTTCAGA-TGTATACGGGGAAGAATTCGAAAAATTGTAC 78562 |||| ||| | || | || ||| || || || ||||| | | || || Sbjct 347536 ATCCAAATACTGCACCAGGATTAAGTGACTGT-TATGGTGAGGAATTTAATGAGTTATA- 347479 Query 78563 ACTAAA---TACGAAGAGGAAGGTCTCGCTATTAAGACAATTGATGCATCTGAACTATGG 78619 | || || ||| ||||||| | | | | || |||||| | ||| || || ||| Sbjct 347478 --TGAACGTTATGAAAAGGAAGGACGTGGTGTAAAAACAATTCAAGCACAAGATCTTTGG 347421 Query 78620 AAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGC 78679 ||||| | || |||| || || || || | |||||| || ||||| Sbjct 347420 TTTGCTATACTTGAATCACAAATGGAAACAGGAGTTCCTTTTATGCTCTATAAAGATGCA 347361 Query 78680 TGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAAAGCTCTAACCTTTGCACA 78739 ||||| | || || ||||| || ||| | ||||| ||||| | ||||| | |||||| Sbjct 347360 TGTAATAAGAAATCGAACCAGAAAAACATTGGTGTAATCAAGTGTTCTAATTTATGCACA 347301 Query 78740 GAAATTCTGGAATACACGGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCT 78799 ||||| |||||||| | ||| |||||| || |||||||| || | ||||| ||| Sbjct 347300 GAAATCATGGAATACTCATCTAAAGATGAAATTGCAGTATGTAACCTTGCTTCTATTGCT 347241 Query 78800 CTACCAAAGTTTGTTGATCGAGAATTAAAGACATTTGATTATTCAAAG-CTCCACGAAAT 78858 |||| ||| ||||| ||| ||| |||||| | ||| | || | ||||| Sbjct 347240 TTACCTCGTTTTATTGATGAGGAAAAAAATGTTTTTGATCAC-CAACGACTATATGAAAT 347182 Query 78859 TACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTGACCGTAACTACTACCCAGT--- 78915 |||||| | || || | |||||| || | || ||||| || || || || | Sbjct 347181 AACAAAAGTTGTGACAAGAAATTTGAACAGAGTTATTGATATGAATTATTATCCGTTACC 347122 Query 78916 -CGAGACTGCTAAATATTCTAATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGAT 78974 | || || | | ||||||| || |||| || ||| | ||||| |||||| Sbjct 347121 ACAAGCACGCGACAG----TAATATGCGTAATCGACCTATCGGTATTGGTGTACAAGGAA 347066 Query 78975 TGGCAGATGTATTCAACTTGTGTGGTCTTCCCTTCGATTGCG--AAGATTCAAGGACTAT 79032 |||||||| |||||| || | ||||| || | || ||| | ||| || Sbjct 347065 TGGCAGATTTATTCACAATGCTAAGACTTCCATTTACTAGCAGTAAGGCTAAAGATTTA- 347007 Query 79033 GAATGCTCATATTTTCGAGACTATTTATCATGCAGCTTTAGAAGCAAGTTCAGAACTTGC 79092 |||| | ||||| ||||| |||||| | || || | ||||| || || ||||| Sbjct 347006 -AATGAAGAAATTTTTGAGACAATTTATTACGCCGCAGTGGAAGCTAGCGTCGATCTTGC 346948 Query 79093 TGAAATTAATGGGCCTTATGAGAG-TTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTC 79151 |||| | || || ||||| || |||| |||| || ||||| |||||| | | | Sbjct 346947 TGAAGAAGAAGGACCATATGAAAGATTTCAAGGGAGT-CCTGCTTCTCAAGGTTTATTAC 346889 Query 79152 AACCAGATCTATGGGAAGGTGAAGCTAAATACAGTGGTCGTTACGATTGGGATGCAATGA 79211 || ||| |||||| || || | |||||| || | | ||||||||| | | Sbjct 346888 AATTTGATTTATGGG---GTAAAAAACCACGCAGTGGACGGTGGAACTGGGATGCACTTA 346832 Query 79212 GAAAGCGTGTAATGACGAAGGGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTG 79271 | ||||| | |||| ||| ||||||| | | ||| | || |||||||| |||| Sbjct 346831 AGGAACGTGTTAAAACGAGTGGTATGAGAAATTCTTTACTCTTGGCTCCAATGCCAACTG 346772 Query 79272 CTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCATACACTACAAACATAT 79331 | || || |||| || || ||||||||||||||||||||||| | ||| | || || | Sbjct 346771 CATCAACATCTCAAATTCTTGGTAATAATGAGTGTTTTGAACCCTTTACTTCCAATATTT 346712 Query 79332 ATCTTCGTCGCACATTAGCTGGTGAATTTGTTGTGGTTAACAAACATCTTGTT 79384 || | ||||| || ||||||||| ||| ||||| || |||||||| Sbjct 346711 ATGTACGTCGTGTTCTAAGTGGTGAATTCCCTGTTGTTAATAAGTATCTTGTT 346659 Score = 132 bits (146), Expect = 6e-26 Identities = 450/688 (65%), Gaps = 16/688 (2%) Strand=Plus/Plus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 |||||||| | || || || ||||| |||||| || ||||| || | | ||| | Sbjct 509781 GGTATCGACCTTGGCACAACGTACTCTGTTGTTGGGGTGTGGCAGAAAGGTGACGTACAC 509840 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATC-GTACGTTGCCTTTACAGATAA 195423 || |||||||| || || ||||| | || || || ||| || ||||||||||| | Sbjct 509841 ATCATCCCGAACGAGATGGGCAACCGCATCACACCGTCTGTA-GTGGCCTTTACAGAGAC 509899 Query 195424 TGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGT 195483 || || || | || |||| ||| ||||| || | |||||| ||| || | Sbjct 509900 GGAGCGACTGATCGGCGATGGCGCGAAAAACCAACTTCCGCAGAACCCGCACAACACAAT 509959 Query 195484 CTTTGACGCGA---AGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGA 195540 || |||||| ||||||| ||||| || |||| || | || || | || Sbjct 509960 CT---ACGCGATCAAGCGTCTCATTGGACGGAAGTACAGCGACGCCACGGTGCAGAAGGA 510016 Query 195541 TATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGT 195600 | ||| ||| || || ||||| | | || | || || | | | | || Sbjct 510017 CAAGAAGTTGCTGTCGTACGAGGTTGTGGCGGACAGGGACGGCAAACCGAAGGTGCAGGT 510076 Query 195601 TGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGAT 195660 || || ||| ||||||| || || | || || || | | |||||| || Sbjct 510077 GGAGGTTGGCGGCAAGAAGAAGCAGTTCACACCTGAGGAGGTGAGTGCGATGGTGCTGCA 510136 Query 195661 TAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGAC 195720 ||||||||||| | || || | | | | ||| | | || || | || ||||| || Sbjct 510137 GAAGATGAAGGAAATCGCAGAGACATACCTCGGTGAGAAAGTAAAGAACGCCGTTGTTAC 510196 Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780 ||| || || ||||||| |||| | || || ||| |||| ||||| || | | ||||| Sbjct 510197 TGTGCCCGCGTACTTCAATGATGCGCAGCGCCAGTCGACGAAGGATGCCGGGACGATTGC 510256 Query 195781 GGGTCTAAACTGTC-TTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTC 195839 ||| || || |||| | | ||||||||||| || || || || || ||||| || || | Sbjct 510257 GGGACTTAA-TGTCGTGCGCATTATCAATGAGCCTACGGCTGCGGCCATTGCATACGGAC 510315 Query 195840 TGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 || |||| | || | || ||| ||| || ||| | ||||| || || ||||| || | Sbjct 510316 TGAACAA-AGCA--GGCG-AGAAAAACAT-CCTTG-TGTTTGACCTTGGCGGTGGCACCT 510369 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 ||||||| || || || | || || | || | ||||| || ||| || |||| Sbjct 510370 TTGATGTGTCCCTGCTTACGATCGACGAGGGCTTCTTCGAGGTTGTGGCAACGAACGGTG 510429 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987 | || || || |||||||| || ||||| Sbjct 510430 ACACACACCTTGGTGGTGAGGACTTCGA 510457 >seq244 Length=386007 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| ||||| || || || | || || || || || |||||||||| ||| | Sbjct 42133 TATGCAGATCTTCGTAAAGACATTGACAGGCAAGACCATTGCCCTCGAGGTGGAGGCCAG 42192 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||||| | || || | || || |||||||| || ||||| || ||||| || ||||| Sbjct 42193 CGACACTGTTGAGAATGTGAAGGCAAAGATTCAGGACAAGGAGGGTATTCCCCCGGATCA 42252 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 || || ||||| ||||||||||| ||||| || || || || ||||| || || ||||| Sbjct 42253 ACAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAGGAGGGCCGCACCCTGGCGGACTACAA 42312 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 | |||| |||||||| || || ||||| || || | || || || |||| Sbjct 42313 CATTCAGAAGGAGTCCACGCTGCACCTGGTGCTCCGCCTCCGTGGAGGTG 42362 Score = 105 bits (116), Expect = 9e-18 Identities = 297/451 (66%), Gaps = 5/451 (1%) Strand=Plus/Minus Query 60174 GTAATCACCAACCCGCTTTTCAAAGAAGTTTGTTTTACCATCCAACGAAATATTTTCCAT 60233 ||| ||||||||| ||| ||||||||||| || || || | ||||||||| | ||||| Sbjct 101601 GTACTCACCAACCTTCTTCTCAAAGAAGTTCGTCTTGCCCTGCAACGAAATCATCTCCAT 101542 Query 60234 AAAATCAAAGGGGTTCTTTGAATTCCAA-ATCGTTGGGTGTCCAACTTGTTTTAAAAGAC 60292 ||| ||||| || |||||||| || || ||||| | || |||| | | || | Sbjct 101541 AAAGTCAAACGGATTCTTTGATTTGTAATGTCGTTCGTTG-CCAAGTGCGACCAGCAGTC 101483 Query 60293 GGTCAGACACGTATTCAATGTATTCCGACATCTTTTCGGAATTCATTCCTATGAGACTAC 60352 |||| | |||| ||||||||||| | ||| || || ||||| || || || | Sbjct 101482 GGTCCGCCACGAATTCAATGTATGTTGCCATGAGATCCGAGTTCATCCCGATCAGTCGCA 101423 Query 60353 ATGGGAGTGCATCTAAAATAAAACCCTTTTCAATCTCAACAGCTTCTTTTATAATCGTAT 60412 ||| || ||||| | || || | || ||||| || || || || ||| || Sbjct 101422 CTGGAAGCGCATCGCAGATGAACTCGCGCTCGATCTCCACCGCCTCGAGGATGATCTCAT 101363 Query 60413 GAATAATATCCTTT-GAAGGTTTTTGTTGAAGCA--TATTAAATAATTCAACTGCAAATT 60469 | || |||||| | || || ||| | | | | | | | || ||||| | Sbjct 101362 GGATTCGCTCCTTTGGCAGCTTGTTGACAATGTAGTTCTCATACAAGAGGCACGCAAAGT 101303 Query 60470 CTTGATGAAGACCTTCGTCACGACTAATAAGTTCATTACTGAAACAAAGTCCGGGAAGTA 60529 | ||| ||||| || || || || || || || ||||| |||||||| | | Sbjct 101302 CGGTATGCAGACCCTCATCCCGCGAGATGAGCTCGTTGCTGAACGTCAGTCCGGGCATCA 101243 Query 60530 GACCCCGCTTCTTTAACCAATATACAGCACAGAACGAACCACTGAAAAAGATACCCTCTA 60589 |||| |||||||| | ||| | | || ||||| || ||| ||| || |||||||| | Sbjct 101242 GACCACGCTTCTTCAGCCAGAACAGTGCGCAGAATGAGCCAGAGAAGAATATACCCTCCA 101183 Query 60590 CACACGCAAACGCAAAAAGACGTTCAGCAAA 60620 | || || |||| ||||| || || || Sbjct 101182 CCGCGGCGAATGCAACGAGACGCTCTGCGAA 101152 Score = 93.3 bits (102), Expect = 6e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 171970 CCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTC 172029 || || ||||| || || ||||| ||||||||||| ||||| || || || || ||||| Sbjct 41413 CCCCCGGATCAACAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAGGAGGGCCGCACCCTG 41472 Query 172030 GCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || || |||||| |||| |||||||| || || ||||| || || | || || || ||| Sbjct 41473 GCGGACTACAACATTCAGAAGGAGTCCACGCTGCACCTGGTGCTCCGCCTCCGTGGAGGT 41532 Query 172090 G 172090 | Sbjct 41533 G 41533 >seq297 Length=935303 Score = 107 bits (118), Expect = 3e-18 Identities = 194/282 (69%), Gaps = 10/282 (4%) Strand=Plus/Plus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || ||||| ||||| ||||||| ||| | || | || || ||||| || | Sbjct 297584 ATGCTGTGGTGACGTGCCCTGCATACTTCAATGACGCGCAGAGGCAAGCAACAAAAGATG 297643 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAA 195827 | | | | || || ||||| ||| | | | | || || |||||||| |||||| Sbjct 297644 CCGGTACAATCGCCGGTCTTAACGTGATCCGCGTCGTGAACGAGCCAACAGCCGCTGCAC 297703 Query 195828 TTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTT--GATCT 195885 | || || ||||||||||||| ||||||| | ||| |||| | | || || Sbjct 297704 TGGCCTACGGTCTGGACAAGACCAAGGAC-------AGCATG-ATTGCGGTGTACGACCT 297755 Query 195886 CGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAA 195945 |||||||||||||| ||| |||| | || | |||| |||||| | ||||| || || Sbjct 297756 TGGTGGTGGTACGTTCGATATCTCCGTGCTTGAGATTGCCGGTGGTGTGTTCGAGGTGAA 297815 Query 195946 GGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||| || ||||| || || || |||||||| || || || Sbjct 297816 GGCCACAAACGGTGACACACACCTTGGTGGTGAGGACTTTGA 297857 >seq286 Length=961496 Score = 95.1 bits (104), Expect = 2e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 171970 CCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTC 172029 || || ||||| || || ||||||||||||||||| ||||| || || || || ||||| Sbjct 812736 CCCCCGGATCAACAGCGTCTTATTTTTGCTGGTAAGCAGCTGGAGGAGGGCCGCACCCTG 812677 Query 172030 GCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || || |||||| |||| ||||||||||| || ||| | || || | || || || ||| Sbjct 812676 GCGGACTACAACATTCAGAAGGAGTCTACGCTGCACTTGGTGCTCCGCCTCCGTGGAGGT 812617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657859776773680