Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20theileri_20[genbank_20GCA_5F002087225.1_202017-04-12] 319 sequences; 29,822,211 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq244 91.5 1e-13 >seq244 Length=386007 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || ||| ||| || || |||||||| || | || ||||| | || || Sbjct 42343 CACCAGGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCCGCCAGGGTGCGGCCCTCCTC 42284 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || || ||||| || | |||||| ||||| | || | ||| || ||||| Sbjct 42283 CAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATACCCTCCTTGTCCTG 42224 Query 33660 AATTTTCTGTTTCAACATAGTCA-CGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||| || |||| ||| ||| | |||||||| | ||||| || | | || || | Sbjct 42223 AATCTTTGCCTTCA-CATTCTCAACAGTGTCGCTGGCCTCCACCTCGAGGGCAATGGTCT 42165 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | ||||| || || ||||| |||||||||||| Sbjct 42164 TGCCTGTCAATGTCTTTACGAAGATCTGCATA 42133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702722060480