Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20theileri_20[genbank_20GCA_5F002087225.1_202017-04-12] 319 sequences; 29,822,211 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq133 443 6e-119 seq22 179 1e-39 seq166 150 5e-31 seq111 132 1e-25 seq193 120 9e-22 seq244 109 2e-18 seq222 102 2e-16 seq255 91.5 4e-13 seq258 84.2 7e-11 >seq133 Length=495741 Score = 443 bits (490), Expect = 6e-119 Identities = 915/1346 (68%), Gaps = 34/1346 (3%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || || ||| | || || || ||||||||||||| ||| | | ||||| | Sbjct 161131 GCTATTGGTATTGATCTTGGCACAACCTATTCTTGTGTTGGTGTCTTCAAGAATGACCAA 161072 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || ||||||||||| ||| | ||||| || ||||| || || ||||| Sbjct 161071 GTGGAGATCATCGCTAATGATCAAGGAAACCGCACAACACCTTCATATGTGGCGTTTACA 161012 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | |||||||| | ||||| ||||||| || ||||||| || Sbjct 161011 GAGACAGAGCGTCTTGTTGGTGATGCCGCAAAGAATCAAGTGGCAATGAATCCAACCAAC 160952 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAAT 349436 || || |||||||| || || | |||||| | | ||| ||| | || | || | Sbjct 160951 ACAGTCTTTGATGCGAAACGTATGATTGGTCGCAAGTTTGATGATCCTGATTTGCAG--T 160894 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTT---GTTCCAAAAGACGGTGATAAACCAATTA 349493 ||||| | || || | || |||| ||| |||| | | | || || ||| | Sbjct 160893 CTGATATGAAGCACTGGCCCTTTAAGGTTACAGTTCGAGATG-----GA-AAGCCAGTGG 160840 Query 349494 TTGAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 | |||| || ||| |||| || || || ||| || || || || ||||| | ||| Sbjct 160839 TACAGGTGGAGTATCAAGGCGAGACCAAGACA-TTCTTCCCAGAGGAAATCAGTGCGATG 160781 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 ||| | | |||||||||||||| || ||||||||| | ||| | | |||| | || Sbjct 160780 GTTCTGGGAAAAATGAAGGAAATAGCAGAAGCATATATTGGTCTACCCGTAAAGAAGGCG 160721 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || | || || || || || ||||||||| | ||||| || ||||| |||||||| Sbjct 160720 GTGGTGACAGTTCCCGCATACTTTAATGATTCGCAGCGACAGGCTACAAAGGATGCTGGT 160661 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 ||||| || || |||| || | || |||||||| || || ||||| || ||||| Sbjct 160660 GCTATTGCTGGTTTGGATGTGTTACGTATTATTAATGAGCCAACAGCTGCTGCCATTGCC 160601 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT---CTTATTTTTGATTTAGGT 349789 || || | ||||| | | || | | | |||| | ||||| |||||| | ||| Sbjct 160600 TACGGTATGGATAAGAAAACAGATAAGGGAGAAAAGGTGGTCCTTATCTTTGATCTTGGT 160541 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 |||||||| ||||||||| | |||| || |||| | || ||||||||||| || ||| Sbjct 160540 GGTGGTACCTTTGATGTAACTTTACTCACTATTGATGGTGGTATTTTTGAAGTGAAGGCA 160481 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || || || ||||| || | ||||| ||||||||||||||||| || || | || Sbjct 160480 ACGGCGGGAGATACCCACTTGGGTGGTGAAGATTTTGATAATCGCCTTGTGGATTACTTC 160421 Query 349910 GTTAAAGAATTTAAG---CGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATG 349966 | || || |||||| ||| | ||| ||| | | | ||| | |||| || Sbjct 160420 GCTACGGAGTTTAAGACACGTTTTGGAAAA---GATGTACGTGGAAATGCACGAGCTGTG 160364 Query 349967 CGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACC 350026 || || || |||| || ||||| |||| ||||| | | || | || || | | Sbjct 160363 CGACGTCTGCGAACGGCATGTGAGCGTGTGAAGCGAACACTCTCCAGTTCTTCCAATGCT 160304 Query 350027 TCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCT 350086 || | ||||||||| | | |||||| ||| |||| ||| |||||||||||| Sbjct 160303 ACTGTGGAAATTGATGCCTTATATGATGGATGTGATCTCTTCTCAAAGATTACACGTGCT 160244 Query 350087 CGGTTTGAAGAATTATGTATGGATCTTTTTAGAGC-AACAATGGATCCTGTGGAAAAAGT 350145 || ||||||||| | ||| |||| ||| |||| | || || ||| |||| || Sbjct 160243 CGTTTTGAAGAAATGTGTCGTGATCAATTT-GAGCGTTGCCTTGAACCAGTGAAAAAGGT 160185 Query 350146 ATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTC 350205 || | ||| | ||| | | | || | || || || || |||||||| || Sbjct 160184 TTTGCAGGATTCGGGTATGGAAGCACGTGATGTTCACGATGTGGTGTTGGTTGGTGGATC 160125 Query 350206 TACACGTATTCCAAAAGTTCAACAGTTACTATCTG-AGTTTTTTAATGGCAAAGAACCTT 350264 || ||||||||| ||||||| | | || | | || ||| || |||||||| Sbjct 160124 CACTCGTATTCCACGTATTCAACAAATTGT-TCAGAACTTCTTTGGAGGTAAAGAACCCA 160066 Query 350265 CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTT 350324 | | || |||||||| ||||| ||||| || |||||||| || || |||||| |||| Sbjct 160065 ATCGTTCTATTAATCCTGATGAGGCTGTGGCTTATGGTGCCGCCGTACAGGCACATATTC 160006 Query 350325 TATCTGGAAATAAGAGTTCT---AAAATTGATGATCTATTACTACTAGATGTAACTCCAC 350381 | ||||| | ||||| || | ||| | || | |||| |||||||| || | Sbjct 160005 TCTCTGG---TGGACGTTCTGAAAAGACTGAAGGACTTCTGTTACTGGATGTAACACCTC 159949 Query 350382 TTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTA 350441 |||| ||||| | |||||| |||| | ||| ||| |||||||||||||| | || || Sbjct 159948 TTTCTCTTGGTGTGGAAACTGCTGGAGGAGTTATGTCTGTTCTTATTCCTCGTAACTCTA 159889 Query 350442 CTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAA 350501 |||| |||| |||| || || | || ||||| ||| |||||||||| | || Sbjct 159888 CTGTGCCTATTCAAAAATCGCAGATATTCTCTACCAATGCTGATAATCAGCGAAATGTGG 159829 Query 350502 CAATTCAAGTATTTGAAGGTGAACGT 350527 ||| | || | ||||||||||||| Sbjct 159828 AGATTAAGGTGTATGAAGGTGAACGT 159803 Score = 143 bits (158), Expect = 8e-29 Identities = 486/750 (65%), Gaps = 8/750 (1%) Strand=Plus/Plus Query 183045 TCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAAAAAACT 183104 || |||||||| || | ||| || | ||||||||||| || ||||| || | Sbjct 159807 TCACCTTCATACACCTTAATCTCCACATTTCGCTGATTATCAGCATTGGTAGAGAATATC 159866 Query 183105 TGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACTTCTCTG 183164 ||| ||| | |||||| | ||| || || || |||| || |||| ||| ||| ||| Sbjct 159867 TGCGATTTTTGAATAGGCACAGTAGAGTTACGAGGAATAAGAACAGACATAACTCCTCCA 159926 Query 183165 GCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGATGTTTTA 183224 |||||||| | || | || | |||| |||||| ||||| | | || || || Sbjct 159927 GCAGTTTCCACACCAAGAGAAAGAGGTGTTACATCCAGTAACAGAAGTCCTTCAGTCTTT 159986 Query 183225 TCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCA 183284 || || | || | ||| || || || || |||||||| || ||||| ||| Sbjct 159987 TCAGAACGTCCACCAGAGAGAATATGTGCCTGTACGGCGGCACCATAAGCCACAGCCTCA 160046 Query 183285 TCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAAAAA-TTCTGAAAGCATTTGTTG 183343 || || ||||| |||||| |||||| || ||| || ||||||| |||||||| Sbjct 160047 TCAGGATTAATAGAACGATTGGGTTCTTTACCTCCAAAGAAGTTCTGAACA-ATTTGTTG 160105 Query 183344 AATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATTACTT--TTA 183401 ||| |||||| | ||| || ||||| || || || || || | | || || | || Sbjct 160106 AATACGTGGAATACGAGTGGATCCACCAACCAACACCACATCGTGAACATCACGTGCTTC 160165 Query 183402 CTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCT-AAATAAATC 183460 | || ||||| | ||||| |||| || || || | | || |||| ||| Sbjct 160166 C--ATACCCGAATCCTGCAAAACCTTTTTCACTGGTTCAAG-GCAACGCTCAAATTGATC 160222 Query 183461 TATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATA 183520 ||| | ||||| || | || | || | ||| || | ||| |||| ||| Sbjct 160223 ACGACACATTTCTTCAAAACGAGCACGTGTAATCTTTGAGAAGAGATCACATCCATCATA 160282 Query 183521 TAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTC 183580 ||||| ||||||||| | | | | | ||| || | ||||| || | || || Sbjct 160283 TAAGGCATCAATTTCCACAGTAGCATTGGAAGAACTGGAGAGTGTTCGCTTCACACGCTC 160342 Query 183581 ACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATATCTTGTTTATGTTT 183640 |||||| |||| || || || | | || || ||| | | ||||| | | Sbjct 160343 ACATGCCGTTCGCAGACGTCGCACAGCTCGTGCATTTCCACGTACATCTTTTCCAAAACG 160402 Query 183641 TCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAA 183700 | | ||||| || ||| || | | | | | ||||||||||||||||||| || Sbjct 160403 TGTCTTAAACTCCGTAGCGAAGTAATCCACAAGGCGATTATCAAAATCTTCACCACCCAA 160462 Query 183701 ATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGA 183760 || ||||| || || || || || |||||||| || || | |||||| | | | | Sbjct 160463 GTGGGTATCTCCCGCCGTTGCCTTCACTTCAAAAATACCACCATCAATAGTGAGTAAAGT 160522 Query 183761 TACATCAAATGTACCACCACCCAAATCAAA 183790 ||||||||| ||||||||||| | |||||| Sbjct 160523 TACATCAAAGGTACCACCACCAAGATCAAA 160552 >seq22 Length=626277 Score = 179 bits (198), Expect = 1e-39 Identities = 224/307 (73%), Gaps = 0/307 (0%) Strand=Plus/Plus Query 206441 CAACACACTGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATAC 206500 || ||| || || | ||| |||||||| ||||| | || | ||||| || | || | Sbjct 347720 CACCACCTTGATCTACATAACGAGCTGTGTTATTCCACACACGAAGCATCGGTACAAGTC 347779 Query 206501 CATTAGAAGTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATGTATAT 206560 |||| || |||||||| |||||| ||||| ||| |||| | ||||||||| | || Sbjct 347780 CATTTGATGTTCCATTCGTTCCTGCAATATAACTTCCAGCAGAGCGAATATTATGAACAT 347839 Query 206561 GTAATCCAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAA 206620 | | ||||| || || ||| ||| ||| ||||||| | ||| | ||||| ||||| Sbjct 347840 GAACACCAATACCACCAGCCATTTTACTGATAATAGCACACTGTTTAAGTGTATCATAAA 347899 Query 206621 TTCCATCAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTG 206680 |||| |||| |||||| || ||| |||| | ||||| ||||| | |||||| || Sbjct 347900 TTCCCTCAATACTATCTTCTTGCATTGCAACAAGGAAACATGAACTCATTTGTGGGTATG 347959 Query 206681 GCGTTCCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAAAT 206740 | || |||| |||||||| || ||||| |||||||||||| || |||||||||||| Sbjct 347960 GTGTACCAGAGTTAAATAAGGTTGGAGTGGCATGTGTAAAAAATCCCAGAGACATTAAAT 348019 Query 206741 TATAAGT 206747 ||| || Sbjct 348020 CATATGT 348026 Score = 134 bits (148), Expect = 4e-26 Identities = 228/329 (69%), Gaps = 6/329 (2%) Strand=Plus/Plus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || ||||||||||| || || |||| | ||||| | ||||| | || ||| ||||| Sbjct 510138 AAGATGAAGGAAATCGCAGAGACATACCTCGGTGAGAAAGTAAAGAACGCCGTTGTTACT 510197 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || || || || |||||||| ||||| | || || ||||| || | |||||| Sbjct 510198 GTGCCCGCGTACTTCAATGATGCGCAGCGCCAGTCGACGAAGGATGCCGGGACGATTGCG 510257 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | ||||| | | || || ||||| || || ||||| || |||||||| || | | Sbjct 510258 GGACTTAATGTCGTGCGCATTATCAATGAGCCTACGGCTGCGGCCATTGCATACGGAC-T 510316 Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801 || ||| || || ||||| || ||| | ||||| | || ||||| || ||| Sbjct 510317 GAACAAAGCAG-----GCGAGAAAAACATCCTTGTGTTTGACCTTGGCGGTGGCACCTTT 510371 Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861 ||||| || || || || | || ||||| | || || ||| ||||| ||||| Sbjct 510372 GATGTGTCCCTGCTTACGATCGACGAGGGCTTCTTCGAGGTTGTGGCAACGAACGGTGAC 510431 Query 349862 ACACATCTTGGTGGAGAAGATTTTGATAA 349890 ||||| |||||||| || || || || || Sbjct 510432 ACACACCTTGGTGGTGAGGACTTCGACAA 510460 Score = 127 bits (140), Expect = 6e-24 Identities = 286/427 (67%), Gaps = 2/427 (0%) Strand=Plus/Plus Query 202384 TAATATATTCCAGTTTTTAGTCCTTGTTTCCAACTATAAAAATGCATATTTGTTAA-TGA 202442 ||||| || || || ||||| || |||||| | || ||||||||| ||| || ||| Sbjct 346372 TAATACATACCCGTCTTTAGACCAGATTTCCATGTGTAGAAATGCATAGATGTCAACTGA 346431 Query 202443 TTTTGCAGTTGGATCTTCCATCCAAAGATTTAAACTTTGCGATTGACAAATATAAGCTCC 202502 || | ||||| | ||||| | |||||||||||||| ||| || || ||| Sbjct 346432 CTT-GAGGTTGGTTTTTCCAAAAATAGATTTAAACTTTGACTCTGATCAACGTATTTTCC 346490 Query 202503 TCTATCTCTAGACATATCTATAAGATTTTTCATTGGTATCTCCCAAACAATTTTATATTT 202562 | ||| | |||||| || | || | || | | || ||||| |||| ||||||| Sbjct 346491 ACGATCCGCTGCCATATCAATCAAATCTCTCTGTCGAATTTCCCAGACAACTTTATATAA 346550 Query 202563 TTCTTTTAGTCGTTTTGGTATAGTGTCGATATATTGAATACTACCTTTATTCTGAATTAT 202622 ||| || || ||| || | ||||| |||| ||| |||| ||| || Sbjct 346551 TTCCTTAAGATCAGATGGAATTTCCTTGATATTCTGAACTGAACCATTATATGCAATAAT 346610 Query 202623 ATTGTTTTTAATTGAATCATCCCAAATACCTAAATTAATAAGATCATTAATTAAATATTT 202682 | ||| || ||||| ||||| || | ||||||||||| ||| | ||| || Sbjct 346611 CTGATTTCGCATATCATCATTCCAAAGTCCAAGTTTAATAAGATCCATAACAAGATACTT 346670 Query 202683 ATTAACAATAATAAACTCACCAGCTAGTGTTCTTCTTGAATAAATATTACTTGTAAATGG 202742 |||||||| | || |||||| ||| | | | ||||||||| ||||| || Sbjct 346671 ATTAACAACAGGGAATTCACCACTTAGAACACGACGTACATAAATATTGGAAGTAAAGGG 346730 Query 202743 TTCAAAACATTCATTATTACCTAAAATTTGACTGGTACTAGCAGTTGGCATAGGTGCAAC 202802 ||||||||| ||||||||||| | ||||||| || ||||||||||| || || | Sbjct 346731 TTCAAAACACTCATTATTACCAAGAATTTGAGATGTTGATGCAGTTGGCATTGGAGCCAA 346790 Query 202803 TAGTAAA 202809 |||||| Sbjct 346791 GAGTAAA 346797 >seq166 Length=457962 Score = 150 bits (166), Expect = 5e-31 Identities = 334/495 (67%), Gaps = 12/495 (2%) Strand=Plus/Minus Query 67768 TTTATTGATAAAGAATTTATCCATTTCTCAACATACGATAATGAACGTTCTATTCCAAAT 67827 ||| | ||||| ||| |||| | || || | ||| |||||| |||||||||| | Sbjct 232686 TTTGTCGATAAGGAACTTATTCTCTTTTCTGTAGCAGATTGTGAACGATCTATTCCAAGT 232627 Query 67828 TTAATTGATGGTTTTAAAATTAGTTTAAGAAAAATTATCTATTCGGCATTTAA--GAAAC 67885 | || ||||| || ||| | || | |||| ||||| | ||| | ||||| | ||| Sbjct 232626 GTTATAGATGGATTAAAACCTGGTCAACGAAAGATTATTTTTTCTTCTTTTAAACGTAAC 232567 Query 67886 GTCTAACTAGTGAAATTAAAGTTGCACAATTTAGTGGTTATGTTTCAGAACATTCAGGCT 67945 || || | ||||| || | |||| || |||||| ||||| |||||| | | | Sbjct 232566 --CTTACACGATCTATTAAGGTGGTACAACTTGCTGGTTACGTTTCTGAACATGCCGCTT 232509 Query 67946 ATCATCACGGTGAAGCTAGTTTAAATTCAT-CAATTGTAGGTTTAGCTCAGAATTTTGTT 68004 ||||||| || ||| | | | | | || | || ||||| ||||| || ||| ||| Sbjct 232508 ATCATCATGGAGAA-CAATCATTAGTACAAACTATAGTAGGATTAGCACAAGATTATGTG 232450 Query 68005 GGATCAAATAATATTAATTTACTAGAACCAAAAGGTCAATTTGGAACTAGATTACTTGGA 68064 |||||||||||| | || || ||| | | ||||||||||| || | || | ||| Sbjct 232449 GGATCAAATAATTTACCACTATTACAACAAGATGGTCAATTTGGTACACGTTTGCAAGGA 232390 Query 68065 GGAAAAGATGCTGCATCTGAAAGATATATATTTACACATCT---AAATACTTTAACTAGA 68121 || |||||| ||| | | | ||||| ||||||| || ||||| | || || Sbjct 232389 GGTAAAGATCATGCCGCAGGTCGTTATATCTTTACACGACTTGCAAATATTGCAA---GA 232333 Query 68122 CTTATCTTTAGACAAGAAGATGATAATATTCTTGAATATTTAGAAGATGATGGTGATAAA 68181 |||| | | | | ||||||| || || | |||||| || |||||||| | Sbjct 232332 TTTATTTATCACCCATCAGATGATTATGTTGTAGAATATAAGGATGATGATGGACTTTCT 232273 Query 68182 GTTGAGCCAATCTATTATGTTCCTATTATTCCTATGATTTTAGTAAATGGTTCAAAAGGG 68241 || || || | |||||||||||||||||||| ||| | | |||||||| | || Sbjct 232272 GTAGAACCTTTTTATTATGTTCCTATTATTCCAATGGTACTTGTAAATGGAACTTCTGGT 232213 Query 68242 ATTGGCACTGGATTT 68256 ||||| || |||||| Sbjct 232212 ATTGGAACAGGATTT 232198 >seq111 Length=1635300 Score = 132 bits (146), Expect = 1e-25 Identities = 253/373 (68%), Gaps = 0/373 (0%) Strand=Plus/Minus Query 378117 TGGATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTAC 378176 |||||| | |||||| |||||| | ||||| || | | || | |||||| || Sbjct 97225 TGGATCGAGTCCATCTTCTCCAAACTTCAATTGTACCACATCTCCTCTTGTGTTTCGCAC 97166 Query 378177 AGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATA 378236 || |||||| | || | | | ||| | ||||| ||||| || || ||||||| Sbjct 97165 TGTACCATCATAACGTACACTGAGGTTTTCCATAGCTTTCATAAGACGACGGTAAATATA 97106 Query 378237 ACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATG 378296 || || | | || ||||| || ||||| | | ||| |||||||| |||||| ||| Sbjct 97105 CCCTGTCTCAGCTGTCTTAACAGCCGTATCTACAAGACCTTCACGACCAGCCATTGTATG 97046 Query 378297 GAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGC 378356 |||||| ||||| ||||| || | ||| ||| ||| || ||| ||| || | ||| Sbjct 97045 GAAGAAAAATTCGGTAGGTGTTAAACCAGAGTAAAAAGAATTCGCAACAAAACCACGTGC 96986 Query 378357 GCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGG 378416 | ||| | || ||| || | |||| ||||||| ||||| | ||| | | | Sbjct 96985 ACTTGGAGCTTCTTCAAATCGGTAAAAATGTGGTAATGAACGATCTTGAAAAGCGTTTAA 96926 Query 378417 AATTCGTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAGCAATATTTAA 378476 ||| ||||||||| ||| | ||||| |||| | | |||||| |||||||||| Sbjct 96925 AATACGTTTTCCACTTACAGTTTGTTGTCCAACACATGCCATCATTTGCGCAATATTTAG 96866 Query 378477 ATCACTACCTTTA 378489 ||||||||||| Sbjct 96865 GGCACTACCTTTA 96853 Score = 102 bits (112), Expect = 2e-16 Identities = 150/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 379246 GCTTCTTCATCTTGAGGCATATGAAGATTCATTTCATCACCATCAAAATCAGCATTATAT 379305 ||||||||| ||| | ||||| |||||||||||||||||||||||| ||||||||| Sbjct 96048 GCTTCTTCAGTTTGTACAAGATGAACATTCATTTCATCACCATCAAAATCGGCATTATAT 95989 Query 379306 GGCTTAGTATCTCCTACATTCATTCTAAAAGTATCACCTTGATATAAAATTTTAACAATA 379365 || | | | | |||| | || ||||||| | || || | | | || || Sbjct 95988 GGGGCACAACAACATTCATTAAATCGAAAAGTA-CGAAATGGTAACACACGTGCACGATG 95930 Query 379366 TGACACATCATTGATAATCTATGAAGTGTAGGCTGACGATTAAATAAGACACCATCCCCA 379425 || |||||| || | | |||||||| ||| |||||||||||||| || |||| ||| Sbjct 95929 TG--CCATCATAGAGATACGATGAAGTGAAGGTTGACGATTAAATAAAACTACATCACCA 95872 Query 379426 TCCATCATATGTCTATGTACTTTATCTCCA 379455 | ||| | ||||| | ||| ||||||| Sbjct 95871 TTCATAACATGTCGCTCTACCACATCTCCA 95842 >seq193 Length=2144 Score = 120 bits (132), Expect = 9e-22 Identities = 478/740 (65%), Gaps = 12/740 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || || || | || || || || || || || | ||| ||||| || || ||| Sbjct 338 GCGATCGGTATTGACCTCGGCACAACGTACTCGTGCGTGGGTGTGTGGCAGAACGAGCGT 397 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| ||||||||||| ||| | || || || || ||||| || |||||| Sbjct 398 GTGGAGATCATTGCCAATGATCAAGGAAACCGCACGACACCGTCGTACGTGGCGTTTACC 457 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||||| |||||||||| | || || || || | || || |||| || Sbjct 458 GACACGGAGCGCCTGATTGGTGACGCGGCGAAGAACCAGGTGGCGATGAACCCAACCAAC 517 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACACAATC 349437 || ||||| || || ||||| || |||||| | ||||| | ||| || | Sbjct 518 ACCGTTTTCGACGCGAAGCGCCTCATTGGTCGCAAGTTCAGC-GACCCGGTGGTGCAGGC 576 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 || | || || | || || | || || |||| | | || || || | || | Sbjct 577 GGACATGAAGCACTGGCCCTTCAAGGTGGTCACAAAGGGTGACGACAAGCCTGTGATCCA 636 Query 349498 GGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTT 349555 ||| || | || || || || || || |||| || || || || ||||| Sbjct 637 GGTGGAGTTCCGCGGCGAGACCAAGAC--GTTCAACCCGGAGGAGATCAGCTCTATGGTG 694 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACA-GTAACTGATGCTGT 349614 | | || |||||||| | || || | || | || || || || | | || || Sbjct 695 CTGATGAAGATGAAGGAGGTGGCGGAGTCGTACCTTGG-CAAGCAGGTGAAGAAGGCGGT 753 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 | || || || || || || || ||| | ||||| || ||||| ||||| |||| Sbjct 754 GGTGACGGTTCCGGCGTACTTCAACGATTCGCAGCGACAGGCGACAAAGGATGCCGGCAC 813 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||||| || | | || || | || || || ||||| || ||||| || || || || Sbjct 814 GATTGCCGGTCTGGAGGTGCTGCGCATCATCAACGAACCGACAGCTGCTGCCATCGCGTA 873 Query 349735 TGGGCTTGATAAAAT-GAG--TGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGG 349791 ||| || || || | ||| || | | || || | || || || || | || || Sbjct 874 TGGTCTGGACAAGGTGGAGGATGGCAAGGAGCGCAACGTGCTCATCTTCGACCTTGGCGG 933 Query 349792 TGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAAC 349851 ||| || |||||||| | || || || | || | || || ||||| || || || || Sbjct 934 TGGCACCTTTGATGTGACTCTGCTCACGATCGACGGTGGTATCTTTGAGGTGAAGGCGAC 993 Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911 |||||| || || |||||||| || || || || || || || || || || || Sbjct 994 GAATGGTGACACGCACCTTGGTGGTGAGGACTTCGACAACCGCCTTGTGTCCCACTTCAC 1053 Query 349912 TAAAGAATTTAAGCGTCAAG 349931 | | || || ||||| |||| Sbjct 1054 TGACGAGTTCAAGCG-CAAG 1072 >seq244 Length=386007 Score = 109 bits (120), Expect = 2e-18 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 || ||| ||||| | | || || || || || || ||||| || ||||| || || || Sbjct 42364 CACACCTCCACGGAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTC 42305 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || ||||||||||| ||||| || ||||| || Sbjct 42304 CGCCAGGGTGCGGCCCTCCTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCCGG 42245 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||||| || || || |||||||| || || || ||||| |||| | || | ||| | Sbjct 42244 GGGAATACCCTCCTTGTCCTGAATCTTTGCCTTCACATTCTCAACAGTGTC-GCTGGCCT 42186 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || | || ||||| || || | ||| ||||| || |||||||| Sbjct 42185 CCACCTCGAGGGCAATGGTCTTGCCTGTCAATGTCTTTACGAAGATCTGCAT 42134 >seq222 Length=1158363 Score = 102 bits (112), Expect = 2e-16 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 16481 TAATAAATCTAGGAATTACTTTTTCAGGATACTGATTTGGTCCATATACATTATTTCCTC 16540 ||||||||| ||||| | ||| || ||||| |||| ||||||||||||||||| |||| Sbjct 145294 TAATAAATCGTGGAATCAATTTCTCTGGATATTGATAAGGTCCATATACATTATTCCCTC 145353 Query 16541 GTGTTATAATAAATGGCATATTAAATGAATGGTTATATGAGTTGACTAACAT-TTCAGCA 16599 | || |||||| |||| | ||| ||| | |||||| || || || || || | Sbjct 145354 GAGTAATAATACATGGAAGTCCAAAAGAAATATGATATGATTTTAC-AATATACTCTACT 145412 Query 16600 GCAGCTTTTGATGCTGCATAAGGATTTGTTGGA 16632 |||||||||| || || || |||||||||||| Sbjct 145413 GCAGCTTTTGTAGCGGCGTAGGGATTTGTTGGA 145445 >seq255 Length=269110 Score = 91.5 bits (100), Expect = 4e-13 Identities = 128/178 (72%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 266973 ATCGGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTA--CGATTATTC 267030 || || |||||||| | || || || || |||||||| || | ||| | | ||| || Sbjct 27703 ATTGGTGATAAATTCTGCAGCCGTCATGGTCAAAAAGGAACTAATGGAATTCAATT--TC 27646 Query 267031 CTGAAGAAAATATGCCATTTAATGAAGATGGAATTAGACCTGATATTATTATTAATCCTC 267090 | |||| ||||||| ||||| ||||| ||| || || | ||||||||||||| Sbjct 27645 GTCAAGAGGATATGCCTTTTAACCGTGATGGTATTGTTCCAGACTTGATTATTAATCCTC 27586 Query 267091 ATGCTATTCCTAGTCGTATGACAATTGGTCAATTAAAAGAGACACTTTTAGGAAAAGT 267148 |||||||||| |||||||| ||| || |||| |||||| || |||||||| Sbjct 27585 ATGCTATTCCATCACGTATGACGGTTGCGCACTTAATAGAGACTCTGGCTGGAAAAGT 27528 Score = 89.7 bits (98), Expect = 2e-12 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 266262 AAATATAATTATACTCATTGTGAAATTCATCCAAGTA-CATTATTAGGTATTTTAGCATC 266320 || ||| | ||| ||||||||||||| ||||| | ||| || || |||| || || Sbjct 28420 AACTATTACTATTCTCATTGTGAAATGGATCCATCAATGATTCTT-GGAATTTGTGCTTC 28362 Query 266321 TTGTATTCCATTTCCAGAACATAATCAAGCACCTCGTCTAACATATCAATGTGCAATGGG 266380 | ||||||| || | |||||||| | || ||| |||||||||| || ||||| Sbjct 28361 TATCATTCCATACCCTAATCATAATCAGTCTCCACGTAATACATATCAATCCGCTATGGG 28302 Query 266381 TAAACAGGCTATGGGTATCTATGTTACAAATTTTAATAATAGAATGGATAAAACAGCATA 266440 ||||| |||||||| || |||| | ||||| |||| | ||||||| ||||| | Sbjct 28301 AAAACAAGCTATGGGAATTTATGCATCTAATTTCAATATGCGTATGGATACTACAGCTCA 28242 Query 266441 TGT 266443 ||| Sbjct 28241 TGT 28239 >seq258 Length=245094 Score = 84.2 bits (92), Expect = 7e-11 Identities = 94/125 (75%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 ||||| |||||| ||||||||||| ||||| | || ||||||| ||||| ||||| Sbjct 205543 CGTGGTACACCAAGTGTAACATTC---TTAGAAGAAATACCAGCATTATGGAATGTATTT 205487 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 | || | ||| |||| || |||||| ||||| ||||||||| | |||| |||| Sbjct 205486 AATGTCATTTGGGTAGCAGGTTCACCACAAGACTGAGCTGCAATAGCTCCAATATTTTCA 205427 Query 377578 CCAGG 377582 ||||| Sbjct 205426 CCAGG 205422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515248206871157