Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trypanosoma_20theileri_20[genbank_20GCA_5F002087225.1_202017-04-12]
319 sequences; 29,822,211 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq244 102 6e-17
>seq244
Length=386007
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || | || || || || || | ||||| || || |||
Sbjct 42134 ATGCAGATCTTCGTAAAGACATTGACAGGCAAGACCATTGCCCTCGAGGTGGAGGCCAGC 42193
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||||||||| ||| | || | ||| ||| ||||| || ||| | || || |||||
Sbjct 42194 GACACTGTTGAGAATGTGAAGGC-AAAGATTCAGGACAAGGAGGGTATTCCCCCGGATCA 42252
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || ||||| || || || ||||| || | ||||| | | || |||||
Sbjct 42253 ACAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAGGAGGGCCGCACCCTGGCGGACTACAA 42312
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 42313 CATTCAGAAGGAGTCCAC 42330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338008285882052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |