Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq990 120 3e-22
seq928 102 7e-17
>seq990
Length=11377
Score = 120 bits (132), Expect = 3e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| ||| ||||||||||||||||| || | ||||| |||||| |||||
Sbjct 10533 GTGGAGGGTACTTTCTTTTTGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCAAGCTG 10474
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||| |||||| | || | |||||||| || ||||| || ||||| || ||| |||||
Sbjct 10473 TTTGCCAGCGAAAATCAAGCGCTGCTGGTCCGGAGGGATACCCTCTTTATCTTGGATTTT 10414
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||| || | |||| |||||| | ||| ||||| | || | |||||||||||
Sbjct 10413 CGATTTCACGTTGTCGATGGTGTCGGACGACTCAACCTCAAGTGTGATGGTTTTGCCGGT 10354
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
||| || || ||||| ||||||||
Sbjct 10353 CAGTGTCTTGACAAAGATCTGCAT 10330
Score = 114 bits (126), Expect = 1e-20
Identities = 126/168 (75%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| |||||||||||||| ||||||| |||||| ||| ||||| || || || ||| |
Sbjct 10293 CTCCTTTTGAATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAA 10234
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
||| || || |||||||| ||||| || || ||||||||| ||| || || || |
Sbjct 10233 GATCAGGCGTTGCTGATCTGGAGGGATACCTTCCTTGTCTTGAATCTTGCTCTTGACATT 10174
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|||| ||||||| ||||||||||| || | || ||||||||
Sbjct 10173 ATCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 10126
>seq928
Length=40960
Score = 102 bits (112), Expect = 7e-17
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| || ||||||| |||||| | ||| || |||||| ||||
Sbjct 463 TTCTGGATGTTGTAGTCGGACAAAGTGCGCCCATCCTCCAACTGCTTGCCAGCGAAGATC 404
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
||||| ||||||||||| || ||||||||||||||| || || || || | ||
Sbjct 403 AGACGTTGCTGATCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGCTCTTCACATTGTCT 344
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| ||||| | ||||||||||| || | || ||||| || || || || || ||
Sbjct 343 ATCGTGTCGCTAGACTCGACCTCGAGTGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433821501460636
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |