Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02- 24] 1,683 sequences; 26,819,972 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq990 95.1 1e-14 >seq990 Length=11377 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || ||||| | |||||||| || || ||| | || |||||||||||| Sbjct 10786 ATGCAGATCTTCGTCAAAACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCGAGC 10845 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | || | || ||| || ||| | || || ||| |||| |||||| Sbjct 10846 GATACGATTGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGCATACCTCCAGACCAG 10905 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | ||||| | |||||||| ||| ||||||| | ||| || || |||| Sbjct 10906 CAGAGATTAATCTTCGCGGGCAAGCAATTGGAAGACGGTAGGACGTTGTCAGACTACAAT 10965 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGTCAAT 25063 || ||||| || ||| || ||||| ||| | || |||| || ||||||| Sbjct 10966 ATTCAGAAGGAAAGCACCCTGCATTTGGTGCTGCGTCTGCGTGGCGGTCAAT 11017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418295419931360