Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1295 111 2e-19
seq959 111 2e-19
>seq1295
Length=44835
Score = 111 bits (122), Expect = 2e-19
Identities = 415/641 (65%), Gaps = 16/641 (2%)
Strand=Plus/Plus
Query 79839 TTCGTATTGT--GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGA 79896
|||||||||| ||| | | | ||||||| || || | ||||| | | |||||
Sbjct 17303 TTCGTATTGTTCGTAGAGAGCC--TCGAACTTTTCCCCATACACATCAGCAAGGCCAGGG 17360
Query 79897 CATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGA 79956
||||||| ||||||||||| | ||| | | | || || |||||||| || |
Sbjct 17361 CATTCGTGCGGACACATCAAAGTCCATGTGCTGTTCTGCTCCACCCGTTTCATGAACAAG 17420
Query 79957 TCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATT 80015
|| || |||||||| || || ||| || || | | | || || || || ||
Sbjct 17421 TCTGGGATCCAAAGCGCGTAGAAA-AGGTCGCGAGCACGGACTTCTTCTTTGCCATGGTT 17479
Query 80016 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 80075
||| || |||||||| | | || || | ||||||||| || | || ||||| |
Sbjct 17480 CTTGCGCAGGTCGAGGAAGGAGAATATGTCCGCATGCCACGGCTCAAGATAGATGGCAAA 17539
Query 80076 AACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 80135
| || || || ||||| || || ||||| | || | || ||||| || || || |
Sbjct 17540 GGCACCGGGACGCTTGTTGCCACCTTGATCGACATACCGCGCAGTGTTGTTGTATACACG 17599
Query 80136 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGC 80195
| ||| || | | || || || || ||||| || || ||||| || | ||
Sbjct 17600 AAGCATAGGTACCAATCCGTTTGAAGTTCCATTTGTGCCACCAATATACGACCCTGTTGC 17659
Query 80196 ACGAAT----ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 80251
||||| ||| |||| |||||||| || || || | || ||||| | ||||
Sbjct 17660 GCGAATGCGGTGTAC--ATTG--AGACCTATACCACCAGCATTCTTTGAGATCATGGCGC 17715
Query 80252 ATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAAC 80311
|| ||| | || ||||| |||||||| || || || || |||||| || | ||||
Sbjct 17716 ATGTTTTCAGAGTGTCATAAATGCCCTCGATACTGTCCTCCTTCATGTCAATCAAGAAAC 17775
Query 80312 AGCTAGACATTTGGTGACGA-CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 80370
| || || |||| | || || || || | || | ||| || ||||| || ||
Sbjct 17776 ATGAAGCCAATTGG-GCGGATGGTGTGCCGGCCATGAACAGGGTTGGTGAAGCATGAGTG 17834
Query 80371 AACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGA 80430
|| | || | |||| || ||||| ||||| || || | || || || ||
Sbjct 17835 AAGTACTTGTTCGACATGAGGTTGTAGGTCTCGATTGCAGCCTCGATGTCTTCGCCGTGT 17894
Query 80431 ATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTC 80471
|| || ||||| |||||||| | |||||| || ||||| ||
Sbjct 17895 ATACCCACCGCAACACGCATGATCATGTGTTGCGGTCTCTC 17935
>seq959
Length=28360
Score = 111 bits (122), Expect = 2e-19
Identities = 120/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 49950 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009
||| | || ||| ||||| || ||||| ||||| || | ||| || ||||||||
Sbjct 16187 AAAGAGCAGACAGGCGAAGTCTGTGTGCATGCCCTCATCACGGGAAATAAGCTCGTTGGA 16128
Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069
||| || || |||||||| || ||||||||||| ||||| || ||||| || || || |
Sbjct 16127 AAAGGTCAGACCGGGCATGAGACCACGCTTTTTGAGCCAGAAAATGGATGCGAAGGAGCT 16068
Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108
||| ||||| || || ||||| ||||| || ||||| ||
Sbjct 16067 AGAGAAGAAAATGCCCTCTACAGCGGCGAAAGCAACGAG 16029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718253689420120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |