Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq990 96.9 4e-15
>seq990
Length=11377
Score = 96.9 bits (106), Expect = 4e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 143053
|| ||||| |||||||| ||||||| |||| ||||||||||| || || || ||
Sbjct 10292 TCCTTTTGAATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAG 10233
Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113
||||| ||||||||||| ||||| || ||||| ||||| ||| || || | |
Sbjct 10232 ATCAGGCGTTGCTGATCTGGAGGGATACCTTCCTTGTCTTGAATCTTGCTCTTGACATTA 10173
Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166
|| | |||||||| | || || || | ||| | ||||||||||| | |||
Sbjct 10172 TCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGACTGT 10120
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||||| || || || | |||| ||| || || |||||||| || |
Sbjct 10784 CCACCACGGAGACGCAGGACCAAGTGTAATGTACTTTCCTTCTGAATGTTGTAGTCTGAC 10725
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || ||| ||||| ||||| || || || |||| || | ||| || || || ||
Sbjct 10724 AACGTTCTCCCATCTTCCAGTTGCTTGCCGGCGAAGATTAGTCTTTGTTGGTCAGGCGGA 10665
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || |||||||| ||| || || | | || | ||| || | | ||| |||
Sbjct 10664 ATACCCTCTTTGTCTTGAATCTTCGACTTCACGTTGTCTATCGTATCACTTGATTCGACT 10605
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | ||||||||||| | ||||| || || |||||||||
Sbjct 10604 TCTAGAGTGATGGTCTTGCCGGTGAGAGTTTTAACAAAGATTTGCATA 10557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507003733684560
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |