Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02- 24] 1,683 sequences; 26,819,972 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq990 134 3e-26 >seq990 Length=11377 Score = 134 bits (148), Expect = 3e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427 ||| ||||||||||| ||||| || | || ||||||||||| | ||| || || || || Sbjct 10977 TTCCTTCTGAATATTGTAGTCTGACAACGTCCTACCGTCTTCCAATTGCTTGCCCGCGAA 10918 Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487 |||| ||||| || || |||||||| || || || || |||||||| | || || || Sbjct 10917 GATTAATCTCTGCTGGTCTGGAGGTATGCCCTCCTTGTCTTGAATCTTCGACTTCACGTT 10858 Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | |||||||| | ||| || ||||| || || ||||| || || || ||||| || Sbjct 10857 GTCAATCGTATCGCTCGATTCGACTTCTAGGGTGATGGTCTTGCCGGTGAGAGTTTTGAC 10798 Query 104548 AAATATCTGCAT 104559 || |||||||| Sbjct 10797 GAAGATCTGCAT 10786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151373571892564