Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq990 96.9 3e-15
>seq990
Length=11377
Score = 96.9 bits (106), Expect = 3e-15
Identities = 110/148 (74%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 24034 TCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAG 24093
|||| |||||| | ||||| ||||| | ||||| |||||| ||||| ||||
Sbjct 10145 TCGAGGTCGAGTCGTCGGACACGATCGATAATGTCAAGAGCAAGATTCAAGACAAGGAAG 10204
Query 24094 GCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA 24153
| || ||||| ||||| || | ||||| | || |||||||||||||||||||| | | |
Sbjct 10205 GTATCCCTCCAGATCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCA 10264
Query 24154 ACGTCAGCGATTATAACATTCAAAAAGA 24181
| ||||| || ||||||||||| ||
Sbjct 10265 CTCTGAGCGACTACAACATTCAAAAGGA 10292
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| ||||| | || || || | || || | |||||||| | |
Sbjct 10558 ATGCAAATCTTTGTTAAAACTCTCACCGGCAAGACCATCACTCTAGAAGTCGAATCAAGT 10617
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || || || | || || |||||| |||||||| || || || || || |||
Sbjct 10618 GATACGATAGACAACGTGAAGTCGAAGATTCAAGACAAAGAGGGTATTCCGCCTGACCAA 10677
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169
|| ||||| || | || |||||||||||| ||||||| || ||||| | || || ||
Sbjct 10678 CAAAGACTAATCTTCGCCGGCAAGCAACTGGAAGATGGGAG-AACGTTGTCAGACTACAA 10736
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199
|||||| || ||| |||| | || || ||
Sbjct 10737 CATTCAGAAGGAAAGTACATTACACTTGGT 10766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429927181340865
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |