Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02- 24] 1,683 sequences; 26,819,972 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq990 96.9 3e-15 >seq990 Length=11377 Score = 96.9 bits (106), Expect = 3e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 24034 TCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAG 24093 |||| |||||| | ||||| ||||| | ||||| |||||| ||||| |||| Sbjct 10145 TCGAGGTCGAGTCGTCGGACACGATCGATAATGTCAAGAGCAAGATTCAAGACAAGGAAG 10204 Query 24094 GCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA 24153 | || ||||| ||||| || | ||||| | || |||||||||||||||||||| | | | Sbjct 10205 GTATCCCTCCAGATCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCA 10264 Query 24154 ACGTCAGCGATTATAACATTCAAAAAGA 24181 | ||||| || ||||||||||| || Sbjct 10265 CTCTGAGCGACTACAACATTCAAAAGGA 10292 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | || || || | || || | |||||||| | | Sbjct 10558 ATGCAAATCTTTGTTAAAACTCTCACCGGCAAGACCATCACTCTAGAAGTCGAATCAAGT 10617 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | || || |||||| |||||||| || || || || || ||| Sbjct 10618 GATACGATAGACAACGTGAAGTCGAAGATTCAAGACAAAGAGGGTATTCCGCCTGACCAA 10677 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || ||||| || | || |||||||||||| ||||||| || ||||| | || || || Sbjct 10678 CAAAGACTAATCTTCGCCGGCAAGCAACTGGAAGATGGGAG-AACGTTGTCAGACTACAA 10736 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||| || ||| |||| | || || || Sbjct 10737 CATTCAGAAGGAAAGTACATTACACTTGGT 10766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429927181340865