Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq959 95.1 2e-14
>seq959
Length=28360
Score = 95.1 bits (104), Expect = 2e-14
Identities = 265/403 (66%), Gaps = 8/403 (2%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|| |||||||| | ||||||| ||| ||||| |||||||||||| || ||||| |||
Sbjct 16444 TCAAAGAAATTGGTCTTGCCCGCCAACGAGATGTTCTCCATGAAGTCAAATGGGTTGGTG 16385
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| | | || | ||| || || | | | ||| || ||||||||||| |
Sbjct 16384 GCGTTGTAATACCTGCTGTTGCCGAGCGCGAGCAGTAGGCGATCGGCCACAAACTCGATG 16325
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCC-AATCATACGACAAGGAATTGCCTCACAGAT 251741
|| || | ||| || | ||||||||||| | | | |||| ||| | || || |
Sbjct 16324 TATTGGCACATGAGGTTGGAGTTCATGCCTAGTAGTGCGAC-AGGCAATGAGTCTGTCAC 16266
Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAG 251801
||| |||||||| ||| || || || | || | ||||| | || || |
Sbjct 16265 GAACTCCTTTTCAATGGTGACGGCTTCAGTGATGATGCTCCTCACCAGCTCCCGATCGGG 16206
Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861
|||||| || | || | || || | | || | | ||||| ||||| || ||
Sbjct 16205 CTTGTTGCGAAGGTGGGAAAAGAGCAGACAGGCGAAGTCTGTGTGCATGCCCTCATCACG 16146
Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921
|| | ||||||||| | ||| || ||||| | ||||| || ||||||||||
Sbjct 16145 GGAAATAAGCTCGTTGGAAAAGGTCAGACCGGGCATGAGACCACGCTTTTTGAGCCAGAA 16086
Query 251922 GAT---TGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
|| |||| ||||| | |||||| | | ||||| |||
Sbjct 16085 AATGGATGCG---AAGGAGCTAGAGAAGAAAATGCCCTCTACA 16046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027814636305403
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |