Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02- 24] 1,683 sequences; 26,819,972 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq959 95.1 2e-14 >seq959 Length=28360 Score = 95.1 bits (104), Expect = 2e-14 Identities = 265/403 (66%), Gaps = 8/403 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || |||||||| | ||||||| ||| ||||| |||||||||||| || ||||| ||| Sbjct 16444 TCAAAGAAATTGGTCTTGCCCGCCAACGAGATGTTCTCCATGAAGTCAAATGGGTTGGTG 16385 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | | || | ||| || || | | | ||| || ||||||||||| | Sbjct 16384 GCGTTGTAATACCTGCTGTTGCCGAGCGCGAGCAGTAGGCGATCGGCCACAAACTCGATG 16325 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCC-AATCATACGACAAGGAATTGCCTCACAGAT 251741 || || | ||| || | ||||||||||| | | | |||| ||| | || || | Sbjct 16324 TATTGGCACATGAGGTTGGAGTTCATGCCTAGTAGTGCGAC-AGGCAATGAGTCTGTCAC 16266 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAG 251801 ||| |||||||| ||| || || || | || | ||||| | || || | Sbjct 16265 GAACTCCTTTTCAATGGTGACGGCTTCAGTGATGATGCTCCTCACCAGCTCCCGATCGGG 16206 Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861 |||||| || | || | || || | | || | | ||||| ||||| || || Sbjct 16205 CTTGTTGCGAAGGTGGGAAAAGAGCAGACAGGCGAAGTCTGTGTGCATGCCCTCATCACG 16146 Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921 || | ||||||||| | ||| || ||||| | ||||| || |||||||||| Sbjct 16145 GGAAATAAGCTCGTTGGAAAAGGTCAGACCGGGCATGAGACCACGCTTTTTGAGCCAGAA 16086 Query 251922 GAT---TGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 || |||| ||||| | |||||| | | ||||| ||| Sbjct 16085 AATGGATGCG---AAGGAGCTAGAGAAGAAAATGCCCTCTACA 16046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027814636305403