Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02- 24] 1,683 sequences; 26,819,972 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq959 95.1 3e-14 >seq959 Length=28360 Score = 95.1 bits (104), Expect = 3e-14 Identities = 167/238 (70%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| ||||| || | |||||||| ||| | ||| | ||| | || || Sbjct 16230 ATCATCACTGAAGCCGTCACCATTGAAAAGGAGTTCGTGACAGACTC-ATTGCCTGTCGC 16288 Query 243562 CTTATT-GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 || | ||||||||||| | |||||| | || |||||||| || || ||||| ||| | Sbjct 16289 ACTACTAGGCATGAACTCCAACCTCATGTGCCAATACATCGAGTTTGTGGCCGATCGCCT 16348 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGT-GTACAACTCCAAGAACCCCTTTGCCTTTATGG 243679 | ||||||| || | || | || |||||| ||| ||||| |||| ||| |||| Sbjct 16349 ACTGCTCGCGCTCGG-CAACAGCAGGTATTACAACGCCACCAACCCATTTGACTTCATGG 16407 Query 243680 AGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 || ||| ||| | || || || || ||||| || ||| | ||| |||||||||| Sbjct 16408 AGAACATCTCGTTGGCGGGCAAGACCAATTTCTTTGAGAAGAGAGTCGGTGATTATCA 16465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102856218116050