Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1295 165 1e-35
seq959 109 7e-19
seq444 84.2 3e-11
>seq1295
Length=44835
Score = 165 bits (182), Expect = 1e-35
Identities = 876/1379 (64%), Gaps = 25/1379 (2%)
Strand=Plus/Plus
Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013
||||| ||||| || || |||||| |||| ||| || | || || ||||| ||||||
Sbjct 16563 GTGTACGGCTCGAAACATTCATTGAAGCCCATGATCTGCGAAGTCGACGCTGTTGGCATG 16622
Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073
|| |||| || | ||| |||| || | | ||| ||||||| | |||
Sbjct 16623 GGCGCCACCAGCAATGAGTTGCGGACTCCGTGCTGTGCAATCTTCGCCTTGAGTGAATCC 16682
Query 114074 CAGTCGTAGTTGAGCT-TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 114132
||||| || || | ||| | | | |||||| || | || || |||| |
Sbjct 16683 CAGTCCCAGA-GATCGGTTGGCGTCACGCCCCACATGTCGTATTGCAGTTCCCCTTTGCT 16741
Query 114133 GGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 114192
| | || || || | | ||||| ||||| || |||||||| |||| || ||
Sbjct 16742 GACAGGGGAGCCAGCGTAAGTCTCATATGGACCGAGTTGCTCCGCCAGTTCGCAGGAGGC 16801
Query 114193 CTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT-GCCTTGGCCTCGT 114251
||| | ||| ||||||| || ||||| || || || || | | |||| | |||
Sbjct 16802 CTCCAACGCTCCGTGATAAATGGTCTCGAAGATCTGAATGTTTAGCCGTCTTG-CTTCGG 16860
Query 114252 CGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGC 114311
|| || |||| | || || || |||| || || || |||||| | ||
Sbjct 16861 GAGAGTCGAACGGCATGCGAAGAGCAAGGAAAGCATCGGCCAGGCCACTGACACCCAAGC 16920
Query 114312 CAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC-CACGGGATAAAAATTCCTA 114370
|||| ||||| || | | ||| ||| ||||| ||| |||||||||| || ||
Sbjct 16921 CAATCGGGCGGTGGCGTAAATTGCTCTTGCGAGCT-TCTGGCACGGGATAATGGTTGATA 16979
Query 114371 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 114430
||||||| | | || | ||||| || || ||||| || | ||||||||| || | | ||
Sbjct 16980 TCGATAATCTTGTTCAAGTTTTTCGTAACCACCTTAGTAACTTCATGAAGTTTCTTGAAA 17039
Query 114431 TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACAC 114490
| |||| | | || || || || | || | || | || || ||||| ||
Sbjct 17040 TTGTAACTCTCATTTTCAATATCCACGTATGTGGGTAAAGCCAGGGATGCAAGATTGCAG 17099
Query 114491 ACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTA 114550
|||| | |||||| |||||||||| ||||| || || |||| || ||| |
Sbjct 17100 ACAGCGACCTCATCAGGGGCAGTGTACTCCATAATCTCAGTGCACAGGTTGGAAGAGCGA 17159
Query 114551 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTAT 114610
||||| || | ||| || || || || ||| |||| |||||||| || |||| |
Sbjct 17160 ATGGTACCAAGGTTTTTCTGGTTGGATTTTCTGTTTGCAGCATCCTTATAGCACATGAAG 17219
Query 114611 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCAC 114669
|| || || ||||||||||| | || ||| || || | ||| | || || || ||||
Sbjct 17220 GGAGTACCTGTCTCCGTTTGAGCCTCGAGGATTGCGTACCATAGTTTCTGC-GCACGCAC 17278
Query 114670 AGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACC 114729
||| || | || ||||| ||||| | | |||||| || || |||| ||| ||
Sbjct 17279 AGTCTCGCGACCACGACCCTCGCGTTCGTATTGTTCGTAGAGAGCCTCGAACTTTTCCCC 17338
Query 114730 CACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCACCCT 114788
| || | || || || || || | || || | | || |||| | ||
Sbjct 17339 ATACACATCAGCAAGGCCAGG-GCATTCGTGCGGACACATCAAAGTCCATGTGCTGTTCT 17397
Query 114789 CCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGC 114848
||| || || |||||||| | |||||||||||| || || |||| || || ||| |
Sbjct 17398 GCTCCACCCGTTTCATGAACAAGTCTGGGATCCAAAGCGCGTAGAAAAGGTCGCGAGCAC 17457
Query 114849 GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 114908
| ||||||| | || || || |||| || | ||| | || ||||| ||||
Sbjct 17458 GGACTTCTTCTTTGCCATGGTTCTTGCGCAGGTCGAGGAAGGAGAATATGTCCGCATGCC 17517
Query 114909 ACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACC 114965
|||| || || || | || | | || ||| ||| | || | |||||||
Sbjct 17518 ACGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTGATCGACATACC 17577
Query 114966 TCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCC 115025
||| ||| || |||| |||||||| || | | || | || |||||||| |
Sbjct 17578 GCGCAGTGTTGTTGTATACACGAAGCATAGGTACCAATCCGTTTGAAGTTCCATTTGTGC 17637
Query 115026 CCCGAATACGAGACTTATTGGCTCTGACATCATG-GATGTGCAT----ACCAATACCCCC 115080
| | |||| ||| | || | || ||| | ||| ||| ||| ||||| ||
Sbjct 17638 CACCAATATACGACCCTGTTGCGC-GA----ATGCGGTGTACATTGAGACCTATACCACC 17692
Query 115081 TGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTC 115140
|| ||||||||| ||||| | ||| || | || || || ||||| |||
Sbjct 17693 AGCATTCTTTGAGATCATGGCGCATGTTTTCAGAGTGTCATAAATGCCCTCGATACTGTC 17752
Query 115141 ACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAA 115200
|||| | | || | ||| || | || ||| | |||||| || || ||||
Sbjct 17753 CTCCTTCATGTCAATCAAGAAACATGAAGCCAATTGGGCGGATGGTGTGCCGGCCATGAA 17812
Query 115201 GAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGA 115259
|||||||||| || || |||| ||| | | ||||| | ||||||||| |
Sbjct 17813 CAGGGTTGGTGAAGCATGAGTGAA-GTACTTGTTCGACATGAGGTTGTAGGTCTCGATTG 17871
Query 115260 CGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318
| || |||||||| ||||| ||||| | || || ||||| | ||||| ||| |||
Sbjct 17872 CAGCCTCGATGTCTTCGCCGTGTATACCCACCGCAACACGCATGATCATGTGTTGCGGT 17930
>seq959
Length=28360
Score = 109 bits (120), Expect = 7e-19
Identities = 345/525 (66%), Gaps = 15/525 (3%)
Strand=Plus/Minus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
||| || ||| ||| | ||||| |||||||| || || || || || ||| ||| ||
Sbjct 16175 GGCGAAGTCTGTGTGCATGCCCTCATCACGGGAAATAAGCTCGTTGGAAAAGGTCAGACC 16116
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||||||||| ||||| || | ||||||||| | || || | |||||||| ||
Sbjct 16115 GGGCATGAGACCACGCTTTTTGAGCCAGAAAATGGATGCGAAGGAGCTAGAGAAGAAAAT 16056
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCG-CGACTTTGTGTC-- 126222
||||| ||| ||||| |||| |||||| |||| || || ||| || | ||
Sbjct 16055 GCCCTCTACAGCGGCGAAAGCAACGAGACG-ACAGC---CGAACGTCGAATTCTTATCGC 16000
Query 126223 -AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTT 126281
|| ||| || |||||| | |||||| || |||| || |||| | | | ||| || |
Sbjct 15999 TAATCCATCGCAGCGCCCAATCCGCCTTCTTACCGATGCATGGGATGTTGTCGATGGCGT 15940
Query 126282 CAAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATG 126341
|| || | | | || | || || ||||||| | || ||||| || || |
Sbjct 15939 TGAATAGATACGTGCGTTGTTTCGGTTCGCTGATGTAGGTGTCGATGAGCAGAGAGTAAG 15880
Query 126342 TTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 126400
| || ||||| | | ||| || | ||| | ||||||| |||| |||||| |
Sbjct 15879 TCTCAGAGTGGATATTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGTGCTTCGGGT 15821
Query 126401 ATCTGTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459
|| || ||||| | | | ||| | | || ||||| ||||| || || || |
Sbjct 15820 ATTTGCACCTCGGCTG-AGAATCGCTCGACGAGGTTCTCGTTGACAATCCCGTCTGATGC 15762
Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTT 126516
|||||||| || |||| || ||||| | || | || |||||| | ||
Sbjct 15761 CGCAAAAAAGGCGAGGACATGAGAGATGAAGAAACGCTCGTCATCATTCAGGCGCTTGTT 15702
Query 126517 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|||||| | | ||| || || ||||| | |||||| || |||||
Sbjct 15701 CCAGTCATGCAAATCTTTTGAAAGATCGATCTCCTCGGCCGTCCA 15657
>seq444
Length=108798
Score = 84.2 bits (92), Expect = 3e-11
Identities = 202/301 (67%), Gaps = 15/301 (5%)
Strand=Plus/Plus
Query 10779 TGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGT 10838
|||| | ||||||||| |||||||| | | ||| || | || || | ||| ||||
Sbjct 52333 TGATATGACGATCAAAACGACCTGGTCTCATGAGAGCTTTATCTAGAACATCTGCTCGGT 52392
Query 10839 TCGTCGCCGCGATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAA 10896
| || | || | |||||||| ||| | | | | | ||||||||||||||| || |
Sbjct 52393 TTGTTCCTGCCAAGACAACGACTTGCTC--CGAGGTGTTAAAGCCATCCATCTCTGTGAG 52450
Query 10897 GAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCACCCGCACTGCGTTG 10956
| |||||||| || || |||||||| || || || ||| || ||||| |||
Sbjct 52451 AATTTGATTGAGAGTAGACTCTCGTTCATCGTT-GCCACCA--CCAAACG-ACTGCTTTG 52506
Query 10957 C-------TTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCAC 11009
| || || | ||||||||||||||| ||||| | ||| || || ||||| |
Sbjct 52507 CCCTCGATTTGCCTATGGCGTCAATTTCATCTATGAAGATGATGCAAGGGGTATTTTTTC 52566
Query 11010 GGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAA 11069
||| | || | ||||| ||||| | || || || || ||||| |||||||
Sbjct 52567 TCGCATTCTGGAATAGGTCTCGTACTCTTGACGGGCCAACGCCGACGAACATCTCCACAA 52626
Query 11070 A 11070
|
Sbjct 52627 A 52627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597341033173640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |