Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq990 107 2e-18
seq1295 98.7 9e-16
>seq990
Length=11377
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | || || || || || || ||| ||||| || || || ||
Sbjct 10559 ATACCACCACGGAGACGCAGGACAAGGTGGAGGGTACTTTCTTTTTGAATGTTGTAGTCA 10500
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| ||| || | ||||| || ||| | ||||| || |||||||||||
Sbjct 10499 GAGAGGGTGCGGCCATCCTCAAGCTGTTTGCCAGCGAAAATCAAGCGCTGCTGGTCCGGA 10440
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || ||||||||||| ||||| ||| | || | || | ||||||||| |||||
Sbjct 10439 GGGATACCCTCTTTATCTTGGATTTTCGATTTCA-CGTTGTCGATGGTGTCGGACGACTC 10381
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||||||||||| || || || ||||| || |||||
Sbjct 10380 AACCTCAAGTGTGATGGTTTTGCCGGTCAGTGTCTTGACAAAGATCTGCAT 10330
>seq1295
Length=44835
Score = 98.7 bits (108), Expect = 9e-16
Identities = 318/490 (65%), Gaps = 8/490 (2%)
Strand=Plus/Minus
Query 123831 AAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCT 123890
|| || |||||||| ||||||||| | || |||||| || ||||| || |
Sbjct 17002 AAAAACTTGAACAAGATTATCGATATCAACCATTATCCCGTGCCAGAAGCTCGCAAGAGC 16943
Query 123891 AATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATG 123950
||||| ||| | ||| | || |||| | || ||||||| || || |
Sbjct 16942 AATTTACGCCACCGCCCGATTGGCTTGGGTGTCAGTGGCCTGGCCGATGCTTTCCTTGCT 16883
Query 123951 CTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACA 124010
|| |||||||||| ||| |||||||| ||| || | || || ||| ||
Sbjct 16882 CTTCGCATGCCGTTCGACTCTCCCGAAGCAAGACGGCTAAACATTCAGATCTTCGAGACC 16823
Query 124011 ATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAA 124070
|||||| |||| || |||||||| ||||||||| ||| | | ||| | || ||
Sbjct 16822 ATTTATCACGGAGCGTTGGAGGCCTCCTGCGAACTGGCGGAGCAACTCGGTCCATATGAG 16763
Query 124071 AGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACA 124130
| |||||| ||| ||| | ||| ||| |||| |||||||||||| | ||
Sbjct 16762 ACTTACGCTGGCTCCCCTGTCAGCAAAGGGGAACTGCAATACGACATGTGGGGCGTGACG 16703
Query 124131 CCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAA--CGCATATCG-AC-GCACGGTTT 124186
|| || || | |||||||| | || | ||| || | || | || |||||| |
Sbjct 16702 CCAACCGATCTCTGGGACTG----GGATTCACTCAAGGCGAAGATTGCACAGCACGGAGT 16647
Query 124187 GCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAA 124246
|| ||||| || |||||||| |||||| || || | ||| | || || | ||
Sbjct 16646 CCGCAACTCATTGCTGGTGGCGCCCATGCCAACAGCGTCGACTTCGCAGATCATGGGCTT 16587
Query 124247 CAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGA 124306
||| |||| |||||||||| |||| || | ||| || || || |||| |||||
Sbjct 16586 CAATGAATGTTTCGAGCCGTACACTTCGAACATTTACAGTCGTCGTGTTCTAGCTGGCGA 16527
Query 124307 TTTTCAAGTG 124316
|| || |||
Sbjct 16526 GTTCCAGGTG 16517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451993690982680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |