Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02- 24] 1,683 sequences; 26,819,972 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq990 107 2e-18 seq1295 98.7 9e-16 >seq990 Length=11377 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | || || || || || || ||| ||||| || || || || Sbjct 10559 ATACCACCACGGAGACGCAGGACAAGGTGGAGGGTACTTTCTTTTTGAATGTTGTAGTCA 10500 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | ||||| || ||| | ||||| || ||||||||||| Sbjct 10499 GAGAGGGTGCGGCCATCCTCAAGCTGTTTGCCAGCGAAAATCAAGCGCTGCTGGTCCGGA 10440 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || || ||||||||||| ||||| ||| | || | || | ||||||||| ||||| Sbjct 10439 GGGATACCCTCTTTATCTTGGATTTTCGATTTCA-CGTTGTCGATGGTGTCGGACGACTC 10381 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||||||||||| || || || ||||| || ||||| Sbjct 10380 AACCTCAAGTGTGATGGTTTTGCCGGTCAGTGTCTTGACAAAGATCTGCAT 10330 >seq1295 Length=44835 Score = 98.7 bits (108), Expect = 9e-16 Identities = 318/490 (65%), Gaps = 8/490 (2%) Strand=Plus/Minus Query 123831 AAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCT 123890 || || |||||||| ||||||||| | || |||||| || ||||| || | Sbjct 17002 AAAAACTTGAACAAGATTATCGATATCAACCATTATCCCGTGCCAGAAGCTCGCAAGAGC 16943 Query 123891 AATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATG 123950 ||||| ||| | ||| | || |||| | || ||||||| || || | Sbjct 16942 AATTTACGCCACCGCCCGATTGGCTTGGGTGTCAGTGGCCTGGCCGATGCTTTCCTTGCT 16883 Query 123951 CTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACA 124010 || |||||||||| ||| |||||||| ||| || | || || ||| || Sbjct 16882 CTTCGCATGCCGTTCGACTCTCCCGAAGCAAGACGGCTAAACATTCAGATCTTCGAGACC 16823 Query 124011 ATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAA 124070 |||||| |||| || |||||||| ||||||||| ||| | | ||| | || || Sbjct 16822 ATTTATCACGGAGCGTTGGAGGCCTCCTGCGAACTGGCGGAGCAACTCGGTCCATATGAG 16763 Query 124071 AGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACA 124130 | |||||| ||| ||| | ||| ||| |||| |||||||||||| | || Sbjct 16762 ACTTACGCTGGCTCCCCTGTCAGCAAAGGGGAACTGCAATACGACATGTGGGGCGTGACG 16703 Query 124131 CCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAA--CGCATATCG-AC-GCACGGTTT 124186 || || || | |||||||| | || | ||| || | || | || |||||| | Sbjct 16702 CCAACCGATCTCTGGGACTG----GGATTCACTCAAGGCGAAGATTGCACAGCACGGAGT 16647 Query 124187 GCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAA 124246 || ||||| || |||||||| |||||| || || | ||| | || || | || Sbjct 16646 CCGCAACTCATTGCTGGTGGCGCCCATGCCAACAGCGTCGACTTCGCAGATCATGGGCTT 16587 Query 124247 CAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGA 124306 ||| |||| |||||||||| |||| || | ||| || || || |||| ||||| Sbjct 16586 CAATGAATGTTTCGAGCCGTACACTTCGAACATTTACAGTCGTCGTGTTCTAGCTGGCGA 16527 Query 124307 TTTTCAAGTG 124316 || || ||| Sbjct 16526 GTTCCAGGTG 16517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451993690982680