Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq32 102 6e-16
seq1399 89.7 4e-12
>seq32
Length=30463
Score = 102 bits (112), Expect = 6e-16
Identities = 408/635 (64%), Gaps = 12/635 (2%)
Strand=Plus/Plus
Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080
|| || || || |||||||| ||||| | || | || | ||| | | | || | ||||
Sbjct 5882 CGGTTGTCGAAGTCTTCACCACCCAAGTGCGTGTCACCGGCCGTGGATTTGACCTCGAAA 5941
Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140
| || || || | | | | | ||||| || |||||||||| || |||||
Sbjct 5942 ATGCCCTCCTCGATGGTAAGTAAGGACACATCGAAAGTGCCACCACCCAAGTCGAAAATC 6001
Query 518141 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 518200
| ||| ||| || || || || || || || || |||| || || || ||
Sbjct 6002 AATACGTTCCGCTCGCCTTCAACCTTCTTGTCGAGGCCGTAGGCAATGGCTGCGGCGGTC 6061
Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260
|| || || ||||| | ||| ||||| | || || || || |||||||| || |||
Sbjct 6062 GGCTCGTTGATAATACGCAACACATTCAAGCCGGCGATGAGACCAGCATCTTTGGTTGCT 6121
Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTA 518320
|||||||| || ||||| |||||||| || ||||| || || |||| | ||
Sbjct 6122 TGTCTTTGAGAGTCGTTGAAATATGCCGGCACAGTGATGACAGCATTGTTGACAGTGCCG 6181
Query 518321 CCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 518380
|| | || | || |||| | ||| || | | | ||| || || || | ||||
Sbjct 6182 CCGAGGTATGATTCAGCAGTTTCTCGCATCTTGGTGAGCACCATGGAAGAGATCTCTTCT 6241
Query 518381 GGG--GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAA 518438
||| |||| | || || |||| | |||| | ||| | | ||
Sbjct 6242 GGGCTGAATTCTTTCTGCTCTC-CCTTGA-ACTCGACTTGGATGATTGGCT--TGCCCTG 6297
Query 518439 C--ATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTT--TGGTCATTA 518494
| | || ||||| || || ||| |||||||||| ||| ||||| |||| ||
Sbjct 6298 CTTCTCGATTACTTTGAAAGGGAAGTGCTTCATATCTGCTTG--CACTTCAGGGTCGTTG 6355
Query 518495 AAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCT 518554
|| | | || || | ||| || ||||| |||| || || ||| || ||||| |
Sbjct 6356 AATTTCCGTCCGATGAGTCGCTTCGCATCGAAAACTGTGTTCTGTGGGTTCATTGCGACC 6415
Query 518555 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 518614
|| | || || ||||| ||||||||| | || || ||||| |||| ||| | || ||
Sbjct 6416 TGGTTCTTCGCGGCATCACCAATCAGACGCTCAGTGTCTGTGAATGCGACAAACGACGGC 6475
Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTC 518649
|||||||| || ||||| || || ||||| || ||
Sbjct 6476 GTTGTGCGGTTGCCTTGGTCGTTTGCAATGATCTC 6510
>seq1399
Length=32242
Score = 89.7 bits (98), Expect = 4e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248
|| ||||| || ||||| || | |||| | || ||||| |||||||| | ||||||
Sbjct 11377 GCGGCAGCTGTCGGTTCGTTGACGATTCGTAGCACGTTAAGCCCAGCAATAGTACCTGCA 11436
Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCA 518308
|| || || || | ||||| ||||| |||||||| ||||| |||| |||||||
Sbjct 11437 TCCTTTGTCGCAGCACGTTGTGCGTCGTTGAAATATGCCGGAACGGTAACGACGGCATTT 11496
Query 518309 GTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGAT 518368
|| || | | || | ||| || ||| || ||||| || | |||||||||||
Sbjct 11497 GTGACCTTCTCGCCTAGATATGCCTCTGCAACTTCCTTCATCTTGCCCAAAATCATTGAA 11556
Query 518369 GAAATTTGTTCTGG 518382
|||| || ||| ||
Sbjct 11557 GAAACTTCTTCGGG 11570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780738883996198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |