Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq451 86.0 7e-12
>seq451
Length=24497
Score = 86.0 bits (94), Expect = 7e-12
Identities = 218/326 (67%), Gaps = 12/326 (4%)
Strand=Plus/Plus
Query 169182 AGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAG 169241
|||||||| || || || || || | ||| ||| ||||| ||||| | | ||||||||
Sbjct 18878 AGACCCTTTATATGTGACCCGTCGTGATCTTGATCGGTCATGATCATTATATGACCATAG 18937
Query 169242 CGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGT--TGAAGACCCAAGATCTTCTTGA 169299
|| || | || ||| ||||| ||||| ||||| |||| || |||||||
Sbjct 18938 CGTAGGGATCGAGTGTCAGTGTACTCTTT--CTTGTGCTGAAGGCCCATGAATTTCTTGA 18995
Query 169300 GATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACATTCTTAC 169359
|| | | ||| || || ||| ||| | | || || ||||| ||||||
Sbjct 18996 TATTCTGAATCTCCTGATTCTTGCTGATCTGATCAATAGAGGCATCGCGAACATTCAGCA 19055
Query 169360 ACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACCCGCGA 169419
|| || || || |||||||||||| | ||||| | ||||||| | | || ||||
Sbjct 19056 TTTTGCCGCGAAGTGGAAAGACGCCAAAAAGATCAGGATCAACGACTGCACGGCCTGCGA 19115
Query 169420 CCGCAAG--GGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACT--TTCCAGAT 169475
||||| || | ||||||||||| ||||| | || || ||||| | | || |
Sbjct 19116 GAGCAAGCAGGGAT--GCTGAATCACCTTCCGTTAAGATAAGTGTACATTTGTACCCG-- 19171
Query 169476 TGCGCCGTACCCGCCTTGTTTGCGTC 169501
| | ||||||||||| ||||| ||
Sbjct 19172 TCCTTGGTACCCGCCTTATTTGCATC 19197
Score = 82.4 bits (90), Expect = 9e-11
Identities = 104/140 (74%), Gaps = 6/140 (4%)
Strand=Plus/Plus
Query 170271 GAGTAGATGTTGGTCAACTTGGCACCATAGCCGTTGCGACCTCC---CACAATTCTCTTC 170327
||||| |||||||| | ||||||||||||||| |||||||| || ||| || | ||
Sbjct 20018 GAGTAAATGTTGGTGAGCTTGGCACCATAGCCATTGCGACCGCCAGTCAC-TTTAGCCTC 20076
Query 170328 TTTGTGTCATCATAATTTGTACTCGTAAGAAGATGCCCAAATGTAAGTTCGGGATTCCAA 170387
| ||||||| ||||| | | ||| || ||||| || || | | ||||||| | |
Sbjct 20077 AT--TGTCATCGTAATTGGAAGACGTGAGGAGATGTCCGAAAATCATTTCGGGAATGTAT 20134
Query 170388 ATACCCTCTTTTTCGTGCAT 170407
||||||||||| || || ||
Sbjct 20135 ATACCCTCTTTGTCATGGAT 20154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589968388278920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |