Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq990 118 8e-22
>seq990
Length=11377
Score = 118 bits (130), Expect = 8e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| |||||| ||||||||| || ||||| || | || || | | |||| || | ||
Sbjct 10532 TGGAGGGTACTTTCTTTTTGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCAAGCTGT 10473
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || ||||| ||||| || || || || || || ||||||||||| |||||
Sbjct 10472 TTGCCAGCGAAAATCAAGCGCTGCTGGTCCGGAGGGATACCCTCTTTATCTTGGATTTTC 10413
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| || | || | ||||| |||| || || ||||| |||| |||||||||||
Sbjct 10412 GATTTCACGTTGTCGATGGTGTCGGACGACTCAACCTCAAGTGTGATGGTTTTGCCGGTC 10353
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || ||||| ||||||||
Sbjct 10352 AGTGTCTTGACAAAGATCTGCAT 10330
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| ||||| ||| || || |||||||| || | | || || | || |||
Sbjct 10994 ACCAAATGCAGGGTGCTTTCCTTCTGAATATTGTAGTCTGACAACGTCCTACCGTCTTCC 10935
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
|||||||| || || || || || | ||| || || || || ||||| || || ||||||
Sbjct 10934 AATTGCTTGCCCGCGAAGATTAATCTCTGCTGGTCTGGAGGTATGCCCTCCTTGTCTTGA 10875
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | || || || ||| ||||| || |||| || |||
Sbjct 10874 ATCTTCGACTTCACGTTGTCAATCGTATCGCTCGATTCGACTTCTAGGGTGATGGTCTTG 10815
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| | |||||| || || ||||||||
Sbjct 10814 CCGGTGAGAGTTTTGACGAAGATCTGCAT 10786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396270271710831
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |