Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq990 136 4e-27
seq928 96.9 3e-15
>seq990
Length=11377
Score = 136 bits (150), Expect = 4e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| ||||||| || ||||| || || || || || ||||| ||| | |
Sbjct 10558 ATGCAAATCTTTGTTAAAACTCTCACCGGCAAGACCATCACTCTAGAAGTCGAATCAAGT 10617
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || |||| | || || ||||| ||||||||||| || || || || || |||
Sbjct 10618 GATACGATAGACAACGTGAAGTCGAAGATTCAAGACAAAGAGGGTATTCCGCCTGACCAA 10677
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | | ||||| ||||| || || ||||| ||| ||||| ||||||| || |||
Sbjct 10678 CAAAGACTAATCTTCGCCGGCAAGCAACTGGAAGATGGGAGAACGTTGTCAGACTACAAC 10737
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
||||| |||||| ||| |||||||||| ||||
Sbjct 10738 ATTCAGAAGGAAAGTACATTACACTTGGTCCTGCG 10772
Score = 113 bits (124), Expect = 4e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| ||||| || || || || || || | ||
Sbjct 10330 ATGCAGATCTTTGTCAAGACACTGACCGGCAAAACCATCACACTTGAGGTTGAGTCGTCC 10389
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | ||| |||||||| ||||| || || ||||| || ||
Sbjct 10390 GACACCATCGACAACGTGAAATCGAAA-ATCCAAGATAAAGAGGGTATCCCTCCGGACCA 10448
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || ||||| || || || |||||||| |||||| | | | | || || || ||
Sbjct 10449 GCAGCGCTTGATTTTCGCTGGCAAACAGCTTGAGGATGGCCGCACCCTCTCTGACTACAA 10508
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
||||||||| ||| || || ||| | || ||||
Sbjct 10509 CATTCAAAAAGAAAGTACCCTCCACCTTGTCCTGCG 10544
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| || ||||| || || || || || ||||| ||| | | |
Sbjct 10786 ATGCAGATCTTCGTCAAAACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCGAGC 10845
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| |||||||| || || |||||||| || ||
Sbjct 10846 GATACGATTGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGCATACCTCCAGACCAG 10905
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | || ||||| || || || || |||| || || | ||||||| || ||
Sbjct 10906 CAGAGATTAATCTTCGCGGGCAAGCAATTGGAAGACGGTAGGACGTTGTCAGACTACAAT 10965
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| |||||| || || || |||||| |||| |||| || ||
Sbjct 10966 ATTCAGAAGGAAAGCACCCTGCATTTGGTGCTGCGTCTGCGTGGCGG 11012
>seq928
Length=40960
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || || || || || || || ||||| || || | | |||||| |||| |
Sbjct 291 AAGACCCTCACGGGCAAGACCATCACACTCGAGGTCGAGTCTAGCGACACGATAGACAAT 350
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || |||||||||||||| || || || || |||||||| |||||| |||||||
Sbjct 351 GTGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCACCCGATCAGCAACGTCTGATCTTC 410
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || || ||| |||||||| | | | |||| || || ||||| || |||| || |
Sbjct 411 GCTGGCAAGCAGTTGGAGGATGGGCGCACTTTGTCCGACTACAACATCCAGAAGGTATGG 470
Query 24899 A 24899
|
Sbjct 471 A 471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449888135279240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |