Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02- 24] 1,683 sequences; 26,819,972 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq990 93.3 3e-14 seq379 93.3 3e-14 >seq990 Length=11377 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| |||||| | |||||||| ||||| || | ||| || | Sbjct 10558 ATGCAAATCTTTGTTAAAACTCTCACCGGCAAGACCATCACTCTAGAAGTCGAATCAAGT 10617 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | | || || ||||||| |||||||| || | || || ||| Sbjct 10618 GATACGATAGACAACGTGAAGTCGAAGATTCAAGACAAAGAGGGTATTCCGCCTGACCAA 10677 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| || | || || || || ||||| |||| ||||| || | || |||||| Sbjct 10678 CAAAGACTAATCTTCGCCGGCAAGCAACTGGAAGATGGGAGAACGTTGTCAGACTACAAC 10737 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||| || ||| ||| || ||| |||| Sbjct 10738 ATTCAGAAGGAAAGTACATTACACTTGGT 10766 >seq379 Length=78611 Score = 93.3 bits (102), Expect = 3e-14 Identities = 204/304 (67%), Gaps = 4/304 (1%) Strand=Plus/Plus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 || |||||||| | ||| || | || | ||||||||| |||||| || || || Sbjct 3381 GTTTCCGGGTTTTTACAGTCACGGCAAAGGACAAACTTGTTGATGAAGCCGTCGAGGTAA 3440 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| ||| || |||| |||||||| ||| | || |||| || ||| Sbjct 3441 TCCTGCAGCTTGCCGGCTTCATGGGCGCCGTTGATGATCCAGCGGTCGTCCTTAGGGTCG 3500 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | || || || |||| ||| | ||||||||||| | || | || || Sbjct 3501 ATGTTGGTCTGGGCACCCAATTCGAATCCGAAGTACTTGATGACATATCCTGGAGGGCGG 3560 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 | ||| || ||||| | | || |||||| | || || ||||| || |||||||| Sbjct 3561 GCGAGCTGCTGGGCGACGTTGCTCAAGTTGACAACAACGGTTTTGATACCATTGCCCTTG 3620 Query 34561 CCTTCGACCTTGG--CGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACAT 34618 || |||||||||| | ||| || ||| ||||||||||| || | ||| | |||| Sbjct 3621 CCCTCGACCTTGGACTGTAGA--CGTTCCATCTTGTAGCGGTAAAATGGGTCGGAGACAT 3678 Query 34619 TGCG 34622 ||| Sbjct 3679 CGCG 3682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412833131973719