Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq1177 87.8 7e-12
>seq1177
Length=120006
Score = 87.8 bits (96), Expect = 7e-12
Identities = 152/215 (71%), Gaps = 7/215 (3%)
Strand=Plus/Minus
Query 309633 AGTAGCATTGACCCTCTCGCCCC-TCAAAGCTCCAACCTTCGATGCGACAATCTCCATCA 309691
|||||||| || || ||||| |||||||| | || || ||| | | ||| ||||
Sbjct 49089 AGTAGCATCT-CCTTCCTGCCCCGTCAAAGCTGCGACTTTGGATAACAGACACTCAATCA 49031
Query 309692 ACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCA 309751
| | || || ||||||||||| ||||||||| | || || |||| ||||| ||| | |
Sbjct 49030 AGTGTGCAATTGTCATACGAGAGGGAATGGCATGCGGATTAATGATTATGTCCGGTGTTA 48971
Query 309752 TTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAATAGTTCCC 309810
||| | || |||| |||||||| |||| | | || | | ||||| || |||
Sbjct 48970 GACCGTCGGATG---TGAACGGCATATCCTCTTGCCGATA-TGTTATCCCAATTGTGCCC 48915
Query 309811 TTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845
||||| |||| || || || || || ||||||||
Sbjct 48914 TTTTGCCCGTGTCTTGATGCGAATTTATCACCAAT 48880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951932308722024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |