Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02- 24] 1,683 sequences; 26,819,972 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq1177 87.8 7e-12 >seq1177 Length=120006 Score = 87.8 bits (96), Expect = 7e-12 Identities = 152/215 (71%), Gaps = 7/215 (3%) Strand=Plus/Minus Query 309633 AGTAGCATTGACCCTCTCGCCCC-TCAAAGCTCCAACCTTCGATGCGACAATCTCCATCA 309691 |||||||| || || ||||| |||||||| | || || ||| | | ||| |||| Sbjct 49089 AGTAGCATCT-CCTTCCTGCCCCGTCAAAGCTGCGACTTTGGATAACAGACACTCAATCA 49031 Query 309692 ACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCA 309751 | | || || ||||||||||| ||||||||| | || || |||| ||||| ||| | | Sbjct 49030 AGTGTGCAATTGTCATACGAGAGGGAATGGCATGCGGATTAATGATTATGTCCGGTGTTA 48971 Query 309752 TTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAATAGTTCCC 309810 ||| | || |||| |||||||| |||| | | || | | ||||| || ||| Sbjct 48970 GACCGTCGGATG---TGAACGGCATATCCTCTTGCCGATA-TGTTATCCCAATTGTGCCC 48915 Query 309811 TTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 ||||| |||| || || || || || |||||||| Sbjct 48914 TTTTGCCCGTGTCTTGATGCGAATTTATCACCAAT 48880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951932308722024