Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq32 95.1 9e-14
seq1399 93.3 3e-13
>seq32
Length=30463
Score = 95.1 bits (104), Expect = 9e-14
Identities = 411/643 (64%), Gaps = 28/643 (4%)
Strand=Plus/Plus
Query 282188 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 282247
|| || || || |||||||| ||||| | || | || | ||| | | | || | ||||
Sbjct 5882 CGGTTGTCGAAGTCTTCACCACCCAAGTGCGTGTCACCGGCCGTGGATTTGACCTCGAAA 5941
Query 282248 AGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATA 282307
| || || || | | | | | ||||| || |||||||||| || |||||
Sbjct 5942 ATGCCCTCCTCGATGGTAAGTAAGGACACATCGAAAGTGCCACCACCCAAGTCGAAAATC 6001
Query 282308 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367
| ||| ||| || || || || || || || || |||| || || || ||
Sbjct 6002 AATACGTTCCGCTCGCCTTCAACCTTCTTGTCGAGGCCGTAGGCAATGGCTGCGGCGGTC 6061
Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427
|| || || ||||| | ||| ||||| | || || || || |||||||| || |||
Sbjct 6062 GGCTCGTTGATAATACGCAACACATTCAAGCCGGCGATGAGACCAGCATCTTTGGTTGCT 6121
Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTT 282486
|||||||| || ||||| |||||||| || ||||| || || |||| |||| ||
Sbjct 6122 TGTCTTTGAGAGTCGTTGAAATATGCCGGCACAGTGATGACAGCAT-TGTTGACAGTGCC 6180
Query 282487 TCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC 282546
|| | || | || |||| | ||| || | | | ||| || || || | |||
Sbjct 6181 GCCGAGGTATGATTCAGCAGTTTCTCGCATCTTGGTGAGCACCATGGAAGAGATCTCTTC 6240
Query 282547 TGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAA---AATATGGTTTATT--- 282600
||| || || |||| || || | | ||| || | ||| | |||
Sbjct 6241 TGG--------GC-TGAATTCTTTCTGCTCT--CCCTTGAACTCGACTTGGATGATTGGC 6289
Query 282601 ---ACCAAC--ATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTT--T 282653
|| | | || ||||| || || | | |||||||||| ||| |||||
Sbjct 6290 TTGCCCTGCTTCTCGATTACTTTGAAAGGGAAGTGCTTCATATCTGCTTG--CACTTCAG 6347
Query 282654 GGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAA 282713
|||| || || | | || || | ||| || ||||| |||| || || ||| || |
Sbjct 6348 GGTCGTTGAATTTCCGTCCGATGAGTCGCTTCGCATCGAAAACTGTGTTCTGTGGGTTCA 6407
Query 282714 CTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACAT 282773
||| | || | || || ||||| ||||||||| | || || ||||| |||| |||
Sbjct 6408 TTGCGACCTGGTTCTTCGCGGCATCACCAATCAGACGCTCAGTGTCTGTGAATGCGACAA 6467
Query 282774 ATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 282816
| || || |||||||| || ||||| || || ||||| || ||
Sbjct 6468 ACGACGGCGTTGTGCGGTTGCCTTGGTCGTTTGCAATGATCTC 6510
>seq1399
Length=32242
Score = 93.3 bits (102), Expect = 3e-13
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 282356 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 282415
|| ||||| || ||||| || | |||| | || ||||| |||||||| | ||||||
Sbjct 11377 GCGGCAGCTGTCGGTTCGTTGACGATTCGTAGCACGTTAAGCCCAGCAATAGTACCTGCA 11436
Query 282416 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCT 282475
|| || || || | ||||| ||||| |||||||| ||||| |||| ||||||| |
Sbjct 11437 TCCTTTGTCGCAGCACGTTGTGCGTCGTTGAAATATGCCGGAACGGTAACGACGGCATTT 11496
Query 282476 GTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGAT 282535
|| || | | || | ||| || ||| || ||||| || | |||||||||||
Sbjct 11497 GTGACCTTCTCGCCTAGATATGCCTCTGCAACTTCCTTCATCTTGCCCAAAATCATTGAA 11556
Query 282536 GAAATTTGTTCTGG 282549
|||| || ||| ||
Sbjct 11557 GAAACTTCTTCGGG 11570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740547771812358
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |