Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acidomyces_20richmondensis_20[genbank_20GCA_5F001572075.1_202016-02-
24] 1,683 sequences; 26,819,972 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1295 221 1e-52
seq990 111 2e-19
>seq1295
Length=44835
Score = 221 bits (244), Expect = 1e-52
Identities = 1103/1730 (64%), Gaps = 69/1730 (4%)
Strand=Plus/Plus
Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTTATCTTCATC 148118
||||| ||||| ||||| |||||||| ||||| | |||| | |||| | ||
Sbjct 16314 TGGTCGATGAATGCGCCGCGGTCAGCAGCCATCTGCACAATATGACGCTGACTG---ATT 16370
Query 148119 TCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACC 148178
||||| | |||||||| || |||| | ||| |||||| ||||||||| ||
Sbjct 16371 TCCCATACAGTCTTGTAAAGGGCTTTGAGGTCATCTGGAATGTTCGGGATGCGCTGAACA 16430
Query 148179 GAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATC 148238
|| |||| | |||| || | || ||| | ||| | | || | | ||||
Sbjct 16431 GACCCGCCATCTGCAATGATGCGGTTCTTCATGTTGTCTGACCAGAGACCGCGATCGACA 16490
Query 148239 AGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA 148298
||||| | | || | | || |||||||| |||||||| || || || || ||
Sbjct 16491 AGGTCCTTTAGCAACCATGGGTTGACCACCTGGAACTCGCCAGCTAGAACACGACGACTG 16550
Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358
|| | ||| || |||| || || | || ||| ||||| ||||||| ||||
Sbjct 16551 TAAATGTTCGAAGTGTACGGCTCGAAACATTCATTGAAGCCCATGATCTGCGAAGTCGAC 16610
Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC 148418
|| || |||||| ||| ||||||| |||||||| | ||| | | | || || |
Sbjct 16611 GCTGTTGGCATGGGCGCCACCAGCAATGAGTTGCGGACTCCGTGCTGTGCAATCTTCGCC 16670
Query 148419 TTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGA 148478
|| || | ||||||||||||| | || |||||| |||||||||||| |||||
Sbjct 16671 TTGAGTGAATCCCAGTCCCAGAGATCGGTTGGCGTCACGCCCCACATGTCGTATTGCAGT 16730
Query 148479 ATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGT 148538
|| ||| | ||| ||| |||| | || || ||| | | ||||||||
Sbjct 16731 TCCCCTTTGCTGACAGGGGAGCCAGCGTAAGTCTCATATGGACCGAGTTGCTCCGCCAGT 16790
Query 148539 TCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGC 148598
|||||| ||||| | ||| |||| ||||| |||||| || || |||| |
Sbjct 16791 TCGCAGGAGGCCTCCAACGCTCCGTGATAAATGGTCTCGAAGATCTGAATGTTTA----- 16845
Query 148599 GCCGCCGACTCGCTT--------TCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAA 148650
|||| || |||| ||| ||||||| || || | || || ||||| |
Sbjct 16846 ---GCCGTCTTGCTTCGGGAGAGTCGAACGGCATGCGAAGAGCAAGGAAAGCATCGGCCA 16902
Query 148651 GGCC-CTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG 148709
|||| ||| || |||| |||||| || ||||| | ||| ||| || ||| |
Sbjct 16903 GGCCACTG-ACACCCAAGCCAATCGGGCGGTGGCGTAAATTGCTCTTGCGAGC-TTCTGG 16960
Query 148710 -AGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAG-ATTGCGCACCACCACCTTTGTA 148766
| ||||| |||||| ||||| |||||| ||||| || || | |||||||| |||
Sbjct 16961 CACGGGATAATGGTTGATATCGATAATCTTGTTCAAGTTTTTCGTA--ACCACCTTAGTA 17018
Query 148767 ATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGAT------GCATCGGTTCACG 148820
| | | || | |||| ||| | |||| | | || | || | |
Sbjct 17019 ACTTCATGAAGTTTCTTGAAATTGTAACTCTCATTTTCAATATCCACGTATGTGGGTAAA 17078
Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880
|| | || || |||||||| || || |||||| ||||| ||||||| | |||||
Sbjct 17079 GCCAGGGATGCAAGATTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCCATAATCTCA 17138
Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTG-TTGCA 148939
| |||||| ||| | || || | ||| || || ||| || ||| |||||
Sbjct 17139 GTGCACAGGTTGGAAGAGCGAATGGTACCAAGGTTTTTCTGGTTGGATTTTCTGTTTGCA 17198
Query 148940 CGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAA 148996
|| ||||| || |||| | || || || ||| || | || | || | |
Sbjct 17199 -GCATCCTTATAGCACATGAAGGGAGTACCTGTCTCCGTTTGAGCCTCGAGGATTGCGTA 17257
Query 148997 CCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCG-TAGCGACCCTCCTGCTCGTAT--AA 149053
|| || || | |||||| ||||| || | || |||||||| | ||||||
Sbjct 17258 CC-AT--AGTTTCTGCGCACGCACAGTCT-CGCGACCACGACCCTCGCGTTCGTATTGTT 17313
Query 149054 AGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGG 149113
||| | ||| ||||||| || || || ||| | || || ||||| | ||||||
Sbjct 17314 CGTAGAGAGC--CTCGAACTTTTCCCCATACACATCAGCAAGGCCAGGGCATTCGTGCGG 17371
Query 149114 GCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCA 149173
||||| | | ||| || || | | ||| || ||||| |||| || || | |||
Sbjct 17372 ACACATCAAAGTCCATGTGCTGTTCTGCTCCACCCGTTTCATGAACAAGTCTGGGATCCA 17431
Query 149174 GAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTT 149233
|||||||| | |||||||| || | ||||| ||| ||| ||||||||
Sbjct 17432 AAGCGCGTAGAAAAGGTCGCGAGCACGGACTTCTTCTTTGCCATGGTTCTTGCGCAGGTC 17491
Query 149234 GAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCG 149293
||| | | |||||||||||| ||||||||||||| || | || | || || ||
Sbjct 17492 GAGGAAGGAGAATATGTCCGCATGCCACGGCTCAAGATAGATGGCAAAGGCACCGGGACG 17551
Query 149294 C---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTC 149350
| ||||| || || ||||| | ||| | ||||||| | || |||| ||||||| |
Sbjct 17552 CTTGTTGCCACCTTGATCGACATACCGCGCAGTGTTGTTGTATACACGAAGCATAGGTAC 17611
Query 149351 AATGCCACTGGCAGTGCCGTTAGTAGAGCTA--ATGCGA--CTGCCGCGCGCTCGCACTT 149406
| || | | ||| || || || | | || ||| ||| ||||| ||
Sbjct 17612 CAATCCGTTTGAAGTTCCATTTGTGCCACCAATATACGACCCTGTTGCGCGAATGC---- 17667
Query 149407 TGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA--GTCGCCGAG 149464
||| || |||| || || || || | | ||||||||| ||||| | | |||
Sbjct 17668 GGTGTACATTGAGACCTATACCACCAGCATTCTTTGAGATCATGGCGCATGTTTTCAGAG 17727
Query 149465 CGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACAT 149524
||| || ||||||||||| ||||| ||||||| | || || || || ||
Sbjct 17728 TGTC--ATAAATGCCCTCGATACTGTCCTCCTTCATGTCAATCAAGAAACATGAAGCCAA 17785
Query 149525 TTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTG 149584
||| | | | ||||||||| ||||| ||| || || || || || || || |
Sbjct 17786 TTGGGCGGATGGTGTGCCGGCCATGAACAGGGTTGGTGAAGCATGAGTGAAGTACTTGTT 17845
Query 149585 GCTCATCATCTCGTACGACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCCTATG 149642
||| | | ||| | ||||| ||| || || ||||| ||||| || || || |
Sbjct 17846 CGACATGAGGTTGTAGGTCTCGATTGCA-GC-CTCGATGTCTTCGCCGTGTATACCCACC 17903
Query 149643 GCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAG 149702
|| || ||||| | ||| || ||||||| ||| || | ||| ||||| | || |
Sbjct 17904 GCAACACGCATGATCATGTGTTGCGGTCTCTCTGCAATTTTCCCGTCAATTCTCAGGAGA 17963
Query 149703 TAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752
|| | ||| || |||||| ||||||| || | || | ||||| ||
Sbjct 17964 TATGAGCGTTCAAGAGTCTTGAAGCCAAAATATTGATAATTGAAGTCCCG 18013
>seq990
Length=11377
Score = 111 bits (122), Expect = 2e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | |||| || ||||| |||||||| || || ||| ||| || |
Sbjct 10991 AAATGCAGGGTGCTTTCCTTCTGAATATTGTAGTCTGACAACGTCCTACCGTCTTCCAAT 10932
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||||||| | || | | ||||||||| ||||| ||||| |||||||| |||
Sbjct 10931 TGCTTGCCCGCGAAGATTAATCTCTGCTGGTCTGGAGGTATGCCCTCCTTGTCTTGAATC 10872
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | |||| ||| ||| | | || || || | ||||| ||| ||||||
Sbjct 10871 TTCGACTTCACGTTGTCAATCGTATCGCTCGATTCGACTTCTAGGGTGATGGTCTTGCCG 10812
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||||||| ||||| ||||||||
Sbjct 10811 GTGAGAGTTTTGACGAAGATCTGCAT 10786
Score = 91.5 bits (100), Expect = 1e-13
Identities = 123/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527
||| || || || ||||| |||| || ||| | | | || ||||| |||||||| |||
Sbjct 10293 CTCCTTTTGAATGTTGTAGTCGCTCAGAGTGCGGCCA-TCTTCGAGTTGCTTGCCGGCGA 10235
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587
| || || || ||||| || |||||||| ||||||||||| ||||| ||||| |
Sbjct 10234 AGATCAGGCGTTGCTGATCTGGAGGGATACCTTCCTTGTCTTGAATCTTGCTCTTGACAT 10175
Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|| | |||||| | | ||| || |||| |||| ||| ||||||||
Sbjct 10174 TATCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 10126
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||| ||||| ||| |||| | ||||||||||| |||||||| || || ||
Sbjct 10484 TCCTCAAGCTGTTTGCCAGCGAAAATCAAGCGCTGCTGGTCCGGAGGGATACCCTCTTTA 10425
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| ||| || || | | || | ||||||| | ||| || || | |||| |
Sbjct 10424 TCTTGGATTTTCGATTTCACGTTGTCGATGGTGTCGGACGACTCAACCTCAAGTGTGATG 10365
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||||||||||| || || || || ||||||||
Sbjct 10364 GTTTTGCCGGTCAGTGTCTTGACAAAGATCTGCAT 10330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483410630034920
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